Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48568 | Soybean | nucleus | 87.8 | 91.53 |
| KRH41763 | Soybean | nucleus | 65.31 | 63.93 |
| KRH60461 | Soybean | nucleus | 65.85 | 56.38 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 51.22 | 50.94 |
| KRH05664 | Soybean | nucleus | 15.72 | 47.93 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 25.75 | 47.5 |
| Solyc03g118840.2.1 | Tomato | nucleus | 43.9 | 41.86 |
| PGSC0003DMT400014732 | Potato | nucleus | 43.63 | 41.49 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 40.65 | 40.87 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 37.94 | 40.82 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 37.94 | 40.58 |
| PGSC0003DMT400078539 | Potato | plastid | 27.37 | 40.56 |
| CDX96741 | Canola | nucleus | 39.84 | 40.38 |
| CDX83878 | Canola | nucleus | 39.02 | 40.34 |
| Bra016574.1-P | Field mustard | nucleus | 39.02 | 40.22 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 36.86 | 40.12 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 32.79 | 39.67 |
| CDX68213 | Canola | nucleus, plastid | 37.13 | 39.26 |
| CDY60141 | Canola | plastid | 37.94 | 39.22 |
| Bra015967.1-P | Field mustard | nucleus | 37.94 | 39.22 |
| CDX73013 | Canola | plastid | 37.4 | 38.87 |
| CDY11092 | Canola | cytosol, plastid | 36.59 | 38.79 |
| Zm00001d011636_P001 | Maize | nucleus | 35.5 | 38.76 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 23.04 | 38.64 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 34.96 | 38.62 |
| Zm00001d043784_P002 | Maize | nucleus | 35.77 | 38.15 |
| OQU87370 | Sorghum | nucleus | 36.04 | 38.11 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 34.96 | 37.94 |
| HORVU3Hr1G064370.1 | Barley | plastid | 37.4 | 35.84 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 33.88 | 35.61 |
| AT1G17970.1 | Thale cress | nucleus | 35.5 | 35.6 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 35.77 | 34.74 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 33.06 | 33.89 |
| Os05t0550000-00 | Rice | nucleus | 32.79 | 33.24 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 30.89 | 32.66 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 30.08 | 32.08 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 30.08 | 31.9 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.89 | 30.32 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 31.44 | 30.21 |
| HORVU1Hr1G082970.1 | Barley | plastid | 28.18 | 27.59 |
| AT4G00070.1 | Thale cress | nucleus | 13.28 | 27.37 |
| KRH53246 | Soybean | nucleus | 12.2 | 24.59 |
| KRH64669 | Soybean | nucleus | 12.74 | 23.27 |
| KRH17980 | Soybean | nucleus | 12.47 | 22.66 |
| KRH16389 | Soybean | nucleus | 12.2 | 21.95 |
| KRH29702 | Soybean | nucleus | 12.74 | 18.95 |
| KRH24699 | Soybean | nucleus | 12.74 | 18.95 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 12.2 | 18.22 |
| KRH52597 | Soybean | nucleus | 25.75 | 17.56 |
| KRH20832 | Soybean | nucleus | 11.38 | 17.0 |
| KRH04957 | Soybean | nucleus | 24.12 | 16.73 |
| KRG90628 | Soybean | nucleus | 15.18 | 16.72 |
| AT1G36950.1 | Thale cress | cytosol | 9.76 | 15.93 |
| KRH16134 | Soybean | nucleus | 23.58 | 15.68 |
| KRH55165 | Soybean | nucleus | 12.74 | 15.11 |
| KRG95955 | Soybean | nucleus | 22.22 | 14.94 |
| KRH30071 | Soybean | cytosol | 13.82 | 14.83 |
| KRH19845 | Soybean | nucleus | 21.95 | 14.73 |
| KRH67668 | Soybean | nucleus | 21.95 | 14.7 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 13.82 | 14.37 |
| KRH61936 | Soybean | nucleus | 21.68 | 14.36 |
| KRH32434 | Soybean | nucleus | 20.33 | 13.91 |
| KRH55161 | Soybean | nucleus | 16.8 | 13.54 |
| KRH26195 | Soybean | nucleus | 16.26 | 13.1 |
| KRH55090 | Soybean | nucleus | 13.01 | 12.9 |
| KRH04591 | Soybean | nucleus | 11.38 | 12.46 |
| KRH04592 | Soybean | nucleus | 10.84 | 11.98 |
| KRH52013 | Soybean | nucleus | 22.76 | 11.86 |
| KRH61306 | Soybean | nucleus | 20.87 | 11.77 |
| KRH22017 | Soybean | nucleus | 16.53 | 11.55 |
| KRH61311 | Soybean | nucleus | 22.76 | 11.44 |
| KRH50319 | Soybean | nucleus | 21.95 | 11.33 |
| KRH70661 | Soybean | mitochondrion, nucleus | 21.68 | 10.97 |
| KRH05663 | Soybean | cytosol | 9.21 | 5.85 |
Protein Annotations
| EMBL:ACUP02005920 | EnsemblPlants:KRH39137 | EnsemblPlantsGene:GLYMA_09G180300 | EntrezGene:100818517 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF96 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:KRH39137 | ProteinID:KRH39137.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00023C8549 | UniProt:I1L494 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:40535586..40541078
Molecular Weight (calculated)
41773.6 Da
IEP (calculated)
8.125
GRAVY (calculated)
-0.861
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVVTEHMKW RRPRNQFRNP ISETDDPITQ IPSIIQSSHS KSTISSLLSS FSTSGETTHA RDQNRTNNNN KSNRKFSAAT FRGFGCTAGS SQKVSVPAVI
101: RSSADWEGKR NRKKNHRRKS NSNGNSGNNT CDDDDDDVSG GTFVDFQDVS CGPGIGFSTD AASVECAVAR KNVSSRGKLD VVEERVTHRE RSSYFGRRTV
201: KPESFSFLDD EPDIFAARPG LEPFGTARFY RHVPHPSPDG LAEIMIIRGR IMMGGRFNSH DQFRDWRLDV DNMSYEQLLE LGERIGYVNT GLKEDEMGLN
301: IRKVKPSSSN DTSKHQLDKK CSVCQEEYES DDELGRLKCD HSYHFQCIKH WLEHKNFCPV CKQEVVVRH
101: RSSADWEGKR NRKKNHRRKS NSNGNSGNNT CDDDDDDVSG GTFVDFQDVS CGPGIGFSTD AASVECAVAR KNVSSRGKLD VVEERVTHRE RSSYFGRRTV
201: KPESFSFLDD EPDIFAARPG LEPFGTARFY RHVPHPSPDG LAEIMIIRGR IMMGGRFNSH DQFRDWRLDV DNMSYEQLLE LGERIGYVNT GLKEDEMGLN
301: IRKVKPSSSN DTSKHQLDKK CSVCQEEYES DDELGRLKCD HSYHFQCIKH WLEHKNFCPV CKQEVVVRH
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.