Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32434 | Soybean | nucleus | 90.73 | 92.58 |
| KRG95955 | Soybean | nucleus | 73.82 | 73.95 |
| KRH67668 | Soybean | nucleus | 72.73 | 72.6 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 60.91 | 61.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.82 | 58.04 |
| KRH05664 | Soybean | nucleus | 12.0 | 54.55 |
| Solyc09g007530.2.1 | Tomato | nucleus | 50.91 | 51.66 |
| PGSC0003DMT400004449 | Potato | nucleus | 50.36 | 51.11 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 35.45 | 33.97 |
| KRH53246 | Soybean | nucleus | 8.91 | 26.78 |
| KRH30071 | Soybean | cytosol | 15.64 | 25.0 |
| KRH64669 | Soybean | nucleus | 9.09 | 24.75 |
| KRH24699 | Soybean | nucleus | 11.09 | 24.6 |
| KRH55165 | Soybean | nucleus | 13.82 | 24.44 |
| KRH22017 | Soybean | nucleus | 23.27 | 24.24 |
| KRH29702 | Soybean | nucleus | 10.91 | 24.19 |
| KRH26195 | Soybean | nucleus | 20.0 | 24.02 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 10.73 | 23.89 |
| KRH55161 | Soybean | nucleus | 19.82 | 23.8 |
| KRH17980 | Soybean | nucleus | 8.73 | 23.65 |
| KRH55090 | Soybean | nucleus | 15.64 | 23.12 |
| KRH16389 | Soybean | nucleus | 8.55 | 22.93 |
| EES00281 | Sorghum | nucleus | 21.09 | 22.52 |
| KRH48568 | Soybean | nucleus | 14.36 | 22.32 |
| KRH20832 | Soybean | nucleus | 10.0 | 22.27 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 20.73 | 22.27 |
| TraesCS1D01G111500.1 | Wheat | nucleus | 21.64 | 22.2 |
| Os01t0159300-01 | Rice | nucleus | 20.18 | 22.16 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 21.45 | 21.97 |
| KRH39137 | Soybean | nucleus | 14.73 | 21.95 |
| TraesCS1A01G107600.1 | Wheat | nucleus | 21.27 | 21.79 |
| KRH41763 | Soybean | nucleus | 14.91 | 21.75 |
| TraesCS1B01G129600.1 | Wheat | nucleus | 21.09 | 21.72 |
| Zm00001d008649_P003 | Maize | cytosol | 20.73 | 21.63 |
| Os05t0163400-03 | Rice | nucleus | 20.36 | 21.01 |
| Zm00001d039769_P002 | Maize | cytosol | 20.73 | 20.69 |
| EES19093 | Sorghum | nucleus | 20.18 | 20.63 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 19.09 | 20.23 |
| TraesCS3B01G120600.2 | Wheat | cytosol | 18.91 | 20.08 |
| TraesCS3D01G105300.1 | Wheat | cytosol | 18.73 | 19.88 |
| KRH60461 | Soybean | nucleus | 15.09 | 19.26 |
| KRG90628 | Soybean | nucleus | 11.09 | 18.21 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 19.27 | 18.0 |
| KRH52597 | Soybean | nucleus | 16.91 | 17.19 |
| KRH50319 | Soybean | nucleus | 22.0 | 16.92 |
| KRH04957 | Soybean | nucleus | 16.18 | 16.73 |
| KRH61306 | Soybean | nucleus | 19.82 | 16.67 |
| KRH70661 | Soybean | mitochondrion, nucleus | 22.0 | 16.6 |
| KRH16134 | Soybean | nucleus | 16.73 | 16.58 |
| KRH52013 | Soybean | nucleus | 21.09 | 16.38 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 10.36 | 16.06 |
| KRH04591 | Soybean | nucleus | 9.82 | 16.02 |
| KRH61311 | Soybean | nucleus | 20.91 | 15.67 |
| KRH04592 | Soybean | nucleus | 9.45 | 15.57 |
| KRH61936 | Soybean | nucleus | 14.36 | 14.18 |
| Bra028576.1-P | Field mustard | cytosol | 6.55 | 12.72 |
| CDY47948 | Canola | nucleus | 11.27 | 12.33 |
| Bra036336.1-P | Field mustard | nucleus | 11.27 | 12.33 |
| KRH05663 | Soybean | cytosol | 10.91 | 10.33 |
Protein Annotations
| EMBL:ACUP02008210 | EnsemblPlants:KRH19845 | EnsemblPlantsGene:GLYMA_13G138700 | EntrezGene:100786013 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF47 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:KRH19845 | ProteinID:KRH19845.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233AC56 | UniProt:I1LZ33 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:25116540..25123897
Molecular Weight (calculated)
61043.4 Da
IEP (calculated)
6.701
GRAVY (calculated)
-0.764
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHRHLYSSS PMFEGEPDQN WNHMHMDQQY VNLGRSSTSD NGSFIYPSEN MSIDNISFPS HWNTAPRSNG YASTSLNIEA PPHQTDVSGT SHDHFLPSPS
101: AGMFYAMPEN YVHQPSNSNY DRQAFSAADG VFNDLTMGNG RGPQKRKSPG IPPVCERGST SRYFNAASAA DRPTSSELWP EKPNMDSLYM PWDHVNMTPT
201: FRGRGLSIRG EGPLRNVRSR SALDLESNLA RAHLSNTHPH NSYSTGLPVD HSSSVVDLST QTSGTLTRDW SPMSSCPPHG RVSSSDANAF NHEASHFLNG
301: SGSSNAPVDV GGFHNEFGTS RNPTAPQSFR NNLTQTARGV RSNYSQRSTP TFRASSSLHL GRVIPSDDGL HMVAESYSSR HPRPLTTVGW QSNDRHGRSR
401: IPSDRYRSLA DEVGLNERFN SEGFMIVDRT SLNGSRNMLD QHRDMRMDID NMSYEELLAL GERIGHVSTG LSEDLISKYL TETIYCSSEQ SQEEETCAIC
501: LEEYKNMDDV GTLKACGHDY HVGCIRKWLS MKKVCPICKV SALSEANKDK
101: AGMFYAMPEN YVHQPSNSNY DRQAFSAADG VFNDLTMGNG RGPQKRKSPG IPPVCERGST SRYFNAASAA DRPTSSELWP EKPNMDSLYM PWDHVNMTPT
201: FRGRGLSIRG EGPLRNVRSR SALDLESNLA RAHLSNTHPH NSYSTGLPVD HSSSVVDLST QTSGTLTRDW SPMSSCPPHG RVSSSDANAF NHEASHFLNG
301: SGSSNAPVDV GGFHNEFGTS RNPTAPQSFR NNLTQTARGV RSNYSQRSTP TFRASSSLHL GRVIPSDDGL HMVAESYSSR HPRPLTTVGW QSNDRHGRSR
401: IPSDRYRSLA DEVGLNERFN SEGFMIVDRT SLNGSRNMLD QHRDMRMDID NMSYEELLAL GERIGHVSTG LSEDLISKYL TETIYCSSEQ SQEEETCAIC
501: LEEYKNMDDV GTLKACGHDY HVGCIRKWLS MKKVCPICKV SALSEANKDK
001: MGHRHFLGSS QFFDDEHDQG WNHTHPEHPY SSQATSGTSE NRSHVYPAEN MLNEGMPVSS HWNSSPGPNA YTDSGHSVER PHYNPGVSGP SHDPSVNSTV
101: PTFSAPHENY VTFASSSSYN SQTWSNASYV DHQSMESVRG AQKRKRPCPS SIYEMGSSSQ YHGDRTPADT HFPSELHLGK SITHDHDPHY MPWLMNPTYR
201: SNNLSIRGES SSRNVRSRPT LDSETSLGRN NLPRSLSLDS HSTHHHSVDH YGSGQFPGQT SHGNKDWNCA RLSPVLRDIN GFSPETNNFL PARSVVNSLS
301: VNTSGYHHHE LTGNRNPTVS HGVPGTSTLS TSSSRFSHRS TSTYRSSSHG SRSGHVASSS GDRSHLVTET YPSRHLRPPP HISWRSGDRP GRRRSSYERF
401: QPPFDEVALH ERFSSEEFMV EDRQPQYYGS RNMLDHHRDM RLDIDNMSYE ELLDLGERIG SVNTGLSDSA ISSCLLATMY YPSYQTEEQR KCAICLEEYK
501: EKEELGEVKG CGHDYHGRCI KKWLSMKNSC PICKSPALPD ASKNSS
101: PTFSAPHENY VTFASSSSYN SQTWSNASYV DHQSMESVRG AQKRKRPCPS SIYEMGSSSQ YHGDRTPADT HFPSELHLGK SITHDHDPHY MPWLMNPTYR
201: SNNLSIRGES SSRNVRSRPT LDSETSLGRN NLPRSLSLDS HSTHHHSVDH YGSGQFPGQT SHGNKDWNCA RLSPVLRDIN GFSPETNNFL PARSVVNSLS
301: VNTSGYHHHE LTGNRNPTVS HGVPGTSTLS TSSSRFSHRS TSTYRSSSHG SRSGHVASSS GDRSHLVTET YPSRHLRPPP HISWRSGDRP GRRRSSYERF
401: QPPFDEVALH ERFSSEEFMV EDRQPQYYGS RNMLDHHRDM RLDIDNMSYE ELLDLGERIG SVNTGLSDSA ISSCLLATMY YPSYQTEEQR KCAICLEEYK
501: EKEELGEVKG CGHDYHGRCI KKWLSMKNSC PICKSPALPD ASKNSS
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.