Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006070.1-P | Field mustard | nucleus | 67.49 | 38.59 |
| Bra009015.1-P | Field mustard | plastid | 70.67 | 37.52 |
| Bra009800.1-P | Field mustard | nucleus | 34.63 | 23.9 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 11.31 | 9.44 |
| Bra015967.1-P | Field mustard | nucleus | 11.66 | 9.24 |
| Bra016574.1-P | Field mustard | nucleus | 9.89 | 7.82 |
| Os05t0163400-03 | Rice | nucleus | 14.13 | 7.5 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 13.43 | 7.42 |
| Bra027467.1-P | Field mustard | nucleus | 10.6 | 7.32 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 13.78 | 7.26 |
| EES19093 | Sorghum | nucleus | 13.78 | 7.25 |
| TraesCS1B01G129600.1 | Wheat | nucleus | 13.43 | 7.12 |
| TraesCS1D01G111500.1 | Wheat | nucleus | 13.43 | 7.09 |
| TraesCS1A01G107600.1 | Wheat | nucleus | 13.43 | 7.08 |
| KRH19845 | Soybean | nucleus | 12.72 | 6.55 |
| Zm00001d008649_P003 | Maize | cytosol | 12.01 | 6.45 |
| KRG95955 | Soybean | nucleus | 12.37 | 6.38 |
| TraesCS3B01G120600.2 | Wheat | cytosol | 11.66 | 6.37 |
| KRH67668 | Soybean | nucleus | 12.37 | 6.35 |
| Zm00001d039769_P002 | Maize | cytosol | 12.37 | 6.35 |
| EES00281 | Sorghum | nucleus | 11.31 | 6.21 |
| Bra024007.1-P | Field mustard | nucleus | 10.25 | 6.21 |
| Os01t0159300-01 | Rice | nucleus | 10.95 | 6.19 |
| TraesCS3D01G105300.1 | Wheat | cytosol | 11.31 | 6.18 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 11.31 | 6.17 |
| Bra036336.1-P | Field mustard | nucleus | 10.6 | 5.96 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 12.37 | 5.94 |
| KRH32434 | Soybean | nucleus | 11.31 | 5.94 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 11.31 | 5.86 |
| Bra001582.1-P | Field mustard | nucleus | 8.83 | 5.72 |
| Bra039659.1-P | Field mustard | nucleus | 8.83 | 5.43 |
| Bra033652.1-P | Field mustard | nucleus | 11.66 | 5.37 |
| Bra039842.1-P | Field mustard | nucleus | 11.31 | 5.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 2.12 | 5.36 |
| Bra038109.1-P | Field mustard | nucleus | 8.83 | 5.21 |
| Bra015221.1-P | Field mustard | nucleus | 10.95 | 5.19 |
| Bra027282.1-P | Field mustard | nucleus | 8.13 | 5.17 |
| Bra038240.1-P | Field mustard | nucleus | 6.01 | 5.11 |
| Bra014043.1-P | Field mustard | nucleus | 10.25 | 5.03 |
| Bra028293.1-P | Field mustard | nucleus | 4.24 | 5.02 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 9.89 | 4.88 |
| Bra023101.1-P | Field mustard | nucleus | 8.83 | 4.69 |
| Bra017205.1-P | Field mustard | nucleus | 8.83 | 4.66 |
| Bra022466.1-P | Field mustard | nucleus | 5.3 | 4.63 |
| Bra040450.1-P | Field mustard | nucleus | 3.89 | 4.55 |
| Bra019499.1-P | Field mustard | nucleus | 2.47 | 4.27 |
| Solyc09g007530.2.1 | Tomato | nucleus | 8.13 | 4.24 |
| PGSC0003DMT400004449 | Potato | nucleus | 8.13 | 4.24 |
| Bra022579.1-P | Field mustard | cytosol | 1.41 | 3.03 |
| Bra024009.1-P | Field mustard | nucleus | 1.41 | 2.29 |
| Bra022580.1-P | Field mustard | cytosol | 0.71 | 1.11 |
Protein Annotations
Description
AT5G10650 (E=5e-029) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA02:+:1128746..1129758
Molecular Weight (calculated)
30519.7 Da
IEP (calculated)
11.079
GRAVY (calculated)
-0.712
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGCSGKRSV NRMVLPRKAS GTVLLRENMS KKDEKSVSFC SRIGCSAKVS YTKGTRMDNN TKLGSSSNGK EIVRSSSRTP GGFGYLRKPA TFTTGSPLIG
101: SSVSSSGSEH TVKGGGLSRN GLRCSSVSEV LPTNATRISV TKRKNSDGES SSSSTRASKT SVSGTKGRNQ SSSSRITDSD NRRNRIVPSI RGNSVVSVNG
201: KRSSSSHRRP SSNSGPSPSR SLVSQDGLSR YNINGIAEVL LALERIEHDQ ELTYERLASL ETSLFSSVMI RFYDEHRDIR YEA
101: SSVSSSGSEH TVKGGGLSRN GLRCSSVSEV LPTNATRISV TKRKNSDGES SSSSTRASKT SVSGTKGRNQ SSSSRITDSD NRRNRIVPSI RGNSVVSVNG
201: KRSSSSHRRP SSNSGPSPSR SLVSQDGLSR YNINGIAEVL LALERIEHDQ ELTYERLASL ETSLFSSVMI RFYDEHRDIR YEA
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQV FLKIYLHPNL YPKLEIIHCF
501: V
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQV FLKIYLHPNL YPKLEIIHCF
501: V
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.