Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63645 | Canola | nucleus | 94.65 | 95.67 |
| Bra024009.1-P | Field mustard | nucleus | 29.34 | 78.29 |
| AT4G31450.2 | Thale cress | nucleus | 80.94 | 76.06 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 8.57 | 43.48 |
| Zm00001d015453_P001 | Maize | cytosol | 11.56 | 41.86 |
| Zm00001d019616_P001 | Maize | cytosol | 11.35 | 41.09 |
| Zm00001d013776_P001 | Maize | cytosol | 11.35 | 41.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.42 | 32.0 |
| Bra019499.1-P | Field mustard | nucleus | 8.35 | 23.78 |
| OQU80147 | Sorghum | nucleus | 16.7 | 21.79 |
| Bra006070.1-P | Field mustard | nucleus | 22.27 | 21.01 |
| EES12797 | Sorghum | nucleus | 16.7 | 20.86 |
| Zm00001d024406_P002 | Maize | nucleus | 15.85 | 20.67 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 16.49 | 20.64 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 16.27 | 20.6 |
| Bra009015.1-P | Field mustard | plastid | 23.34 | 20.45 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 16.27 | 20.27 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 16.06 | 20.16 |
| Bra023101.1-P | Field mustard | nucleus | 22.7 | 19.89 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 23.13 | 19.64 |
| Os08t0241400-00 | Rice | nucleus | 15.85 | 19.63 |
| Zm00001d026248_P001 | Maize | nucleus | 15.85 | 19.47 |
| Solyc08g006460.2.1 | Tomato | nucleus | 22.06 | 19.4 |
| PGSC0003DMT400067670 | Potato | nucleus | 21.63 | 19.13 |
| KRH16134 | Soybean | nucleus | 22.7 | 19.1 |
| KRH04957 | Soybean | nucleus | 21.63 | 18.98 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 16.06 | 18.89 |
| PGSC0003DMT400075959 | Potato | nucleus | 21.84 | 18.72 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 20.56 | 18.68 |
| Bra038109.1-P | Field mustard | nucleus | 18.84 | 18.33 |
| Bra022580.1-P | Field mustard | cytosol | 7.07 | 18.33 |
| Solyc12g096420.1.1 | Tomato | nucleus | 21.41 | 18.15 |
| KRH52597 | Soybean | nucleus | 20.98 | 18.11 |
| Bra015967.1-P | Field mustard | nucleus | 13.7 | 17.93 |
| Bra017205.1-P | Field mustard | nucleus | 20.56 | 17.88 |
| EES04530 | Sorghum | nucleus | 19.7 | 17.76 |
| Bra039659.1-P | Field mustard | nucleus | 17.34 | 17.61 |
| Bra040450.1-P | Field mustard | nucleus | 8.99 | 17.36 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 12.42 | 17.11 |
| Os06t0695600-01 | Rice | nucleus | 21.2 | 17.1 |
| Bra027467.1-P | Field mustard | nucleus | 14.99 | 17.07 |
| Os04t0603200-01 | Rice | nucleus | 11.99 | 17.02 |
| Bra001582.1-P | Field mustard | nucleus | 15.42 | 16.48 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 20.13 | 16.26 |
| Bra027282.1-P | Field mustard | nucleus | 15.42 | 16.18 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 19.7 | 16.06 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 20.13 | 16.04 |
| Zm00001d014609_P002 | Maize | nucleus | 19.7 | 15.73 |
| Zm00001d015289_P001 | Maize | nucleus | 19.06 | 15.72 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 18.84 | 15.6 |
| KXG20741 | Sorghum | nucleus | 19.7 | 15.59 |
| KRH61936 | Soybean | nucleus | 18.2 | 15.26 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 18.63 | 14.92 |
| Bra022466.1-P | Field mustard | nucleus | 10.28 | 14.81 |
| Bra016574.1-P | Field mustard | nucleus | 11.35 | 14.8 |
| Os02t0150700-01 | Rice | extracellular | 20.13 | 14.66 |
| Bra033652.1-P | Field mustard | nucleus | 19.06 | 14.47 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 18.63 | 14.43 |
| Bra038240.1-P | Field mustard | nucleus | 10.28 | 14.41 |
| Bra009800.1-P | Field mustard | nucleus | 12.63 | 14.39 |
| Bra022579.1-P | Field mustard | cytosol | 3.85 | 13.64 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 19.06 | 12.81 |
| Bra039842.1-P | Field mustard | nucleus | 15.63 | 12.23 |
| Bra015221.1-P | Field mustard | nucleus | 15.63 | 12.23 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 15.2 | 12.22 |
| Bra014043.1-P | Field mustard | nucleus | 14.35 | 11.63 |
| Bra028293.1-P | Field mustard | nucleus | 5.57 | 10.88 |
| Bra028576.1-P | Field mustard | cytosol | 6.21 | 10.25 |
| Bra036336.1-P | Field mustard | nucleus | 4.93 | 4.57 |
Protein Annotations
| EnsemblPlants:Bra024007.1 | EnsemblPlants:Bra024007.1-P | EnsemblPlantsGene:Bra024007 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002540F14 | UniProt:M4E5F3 | MapMan:35.1 |
Description
AT4G31450 (E=3e-169) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA03:-:28280802..28282544
Molecular Weight (calculated)
51861.6 Da
IEP (calculated)
8.140
GRAVY (calculated)
-0.751
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRWSGKRAI EGRPDTKKGS GVVLRDRFNN SICSDEKKSM KFTRFVGSSY KKEKAVWSST SSRSSPNGKE VIGTSSKIPV SISSSSSVKN EKQPQVAIDS
101: SESSKGSEDE IETEILEEEP RVHNKLKVVE SSDLPSSSRA KKGFRQRFGL SKQEFRPGPS SQSTNRGCSP LLSGFGLEKR LSGKVDTISK RRVYGESSSS
201: SSARGKKIVS ELPSEERRLV FNPRGGSVSD SRRARHCILN DASGGSQRSV NRGDSRIRFT NQGSGSRNGL SSITTREMSQ SETSNNLNSP VSLELLSGFP
301: DFGSLSSQDS FRNYNLDGIS EILPELDRIE QDIELNYEEL LIMETGLLLG GLSFYDQHRD MRLDIDNMSY EELLALEERI GTVSTALTEE AISKSLKTSI
401: YQMKPSNDHK EDAKCSICQE EYTIGDEVGR LHCEHAYHLK CVQEWLRMKS WCPICKTIAD TSSSSSK
101: SESSKGSEDE IETEILEEEP RVHNKLKVVE SSDLPSSSRA KKGFRQRFGL SKQEFRPGPS SQSTNRGCSP LLSGFGLEKR LSGKVDTISK RRVYGESSSS
201: SSARGKKIVS ELPSEERRLV FNPRGGSVSD SRRARHCILN DASGGSQRSV NRGDSRIRFT NQGSGSRNGL SSITTREMSQ SETSNNLNSP VSLELLSGFP
301: DFGSLSSQDS FRNYNLDGIS EILPELDRIE QDIELNYEEL LIMETGLLLG GLSFYDQHRD MRLDIDNMSY EELLALEERI GTVSTALTEE AISKSLKTSI
401: YQMKPSNDHK EDAKCSICQE EYTIGDEVGR LHCEHAYHLK CVQEWLRMKS WCPICKTIAD TSSSSSK
001: MDRWSSKRAM EARPDSKKKG GVVFRDRFNS NSCKVPICSD EKKSMNFTRF VGSSDKKEKS VLSTYRSSPN GKEVIGTSSK ICISSSSSVK SGEKQPFSQI
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
Arabidopsis Description
At4g31450/F3L17_20 [Source:UniProtKB/TrEMBL;Acc:Q944Q9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.