Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39137 | Soybean | nucleus | 91.53 | 87.8 |
| KRH41763 | Soybean | nucleus | 68.93 | 64.72 |
| KRH60461 | Soybean | nucleus | 68.36 | 56.15 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 53.39 | 50.94 |
| KRH05664 | Soybean | nucleus | 16.95 | 49.59 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 26.84 | 47.5 |
| Solyc03g118840.2.1 | Tomato | nucleus | 46.05 | 42.12 |
| PGSC0003DMT400014732 | Potato | nucleus | 45.76 | 41.75 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 42.66 | 41.14 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 39.27 | 40.52 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 39.27 | 40.29 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 34.18 | 39.67 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 37.85 | 39.53 |
| CDY60141 | Canola | plastid | 39.83 | 39.5 |
| Bra015967.1-P | Field mustard | nucleus | 39.83 | 39.5 |
| CDX73013 | Canola | plastid | 39.55 | 39.44 |
| CDX83878 | Canola | nucleus | 39.55 | 39.22 |
| CDX96741 | Canola | nucleus | 40.11 | 39.01 |
| PGSC0003DMT400078539 | Potato | plastid | 27.4 | 38.96 |
| CDX68213 | Canola | nucleus, plastid | 38.14 | 38.68 |
| Bra016574.1-P | Field mustard | nucleus | 38.98 | 38.55 |
| CDY11092 | Canola | cytosol, plastid | 37.85 | 38.51 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 36.16 | 38.32 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 36.72 | 38.24 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 23.73 | 38.18 |
| Zm00001d011636_P001 | Maize | nucleus | 36.44 | 38.17 |
| OQU87370 | Sorghum | nucleus | 37.57 | 38.11 |
| Zm00001d043784_P002 | Maize | nucleus | 36.44 | 37.28 |
| AT1G17970.1 | Thale cress | nucleus | 37.85 | 36.41 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 35.88 | 36.18 |
| HORVU3Hr1G064370.1 | Barley | plastid | 38.7 | 35.58 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 35.03 | 34.44 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 36.72 | 34.21 |
| Os05t0550000-00 | Rice | nucleus | 33.62 | 32.69 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 31.36 | 31.81 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 30.79 | 31.5 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 30.79 | 31.32 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 32.2 | 30.32 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 32.77 | 30.21 |
| HORVU1Hr1G082970.1 | Barley | plastid | 29.38 | 27.59 |
| AT4G00070.1 | Thale cress | nucleus | 13.56 | 26.82 |
| KRH53246 | Soybean | nucleus | 12.71 | 24.59 |
| KRH64669 | Soybean | nucleus | 13.28 | 23.27 |
| KRH17980 | Soybean | nucleus | 12.99 | 22.66 |
| KRH16389 | Soybean | nucleus | 12.99 | 22.44 |
| KRH29702 | Soybean | nucleus | 13.56 | 19.35 |
| KRH24699 | Soybean | nucleus | 13.56 | 19.35 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 12.71 | 18.22 |
| KRH52597 | Soybean | nucleus | 26.27 | 17.19 |
| KRH20832 | Soybean | nucleus | 11.86 | 17.0 |
| KRH04957 | Soybean | nucleus | 24.29 | 16.17 |
| KRG90628 | Soybean | nucleus | 15.25 | 16.12 |
| AT1G36950.1 | Thale cress | cytosol | 9.89 | 15.49 |
| KRH16134 | Soybean | nucleus | 24.01 | 15.32 |
| KRH55165 | Soybean | nucleus | 12.99 | 14.79 |
| KRG95955 | Soybean | nucleus | 22.6 | 14.57 |
| KRH30071 | Soybean | cytosol | 14.12 | 14.53 |
| KRH19845 | Soybean | nucleus | 22.32 | 14.36 |
| KRH67668 | Soybean | nucleus | 22.32 | 14.34 |
| KRH61936 | Soybean | nucleus | 21.75 | 13.82 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 13.84 | 13.8 |
| KRH32434 | Soybean | nucleus | 20.34 | 13.36 |
| KRH55161 | Soybean | nucleus | 16.95 | 13.1 |
| KRH55090 | Soybean | nucleus | 13.56 | 12.9 |
| KRH04591 | Soybean | nucleus | 12.15 | 12.76 |
| KRH26195 | Soybean | nucleus | 16.38 | 12.66 |
| KRH04592 | Soybean | nucleus | 11.58 | 12.28 |
| KRH52013 | Soybean | nucleus | 24.01 | 12.01 |
| KRH61306 | Soybean | nucleus | 22.03 | 11.93 |
| KRH61311 | Soybean | nucleus | 24.01 | 11.58 |
| KRH50319 | Soybean | nucleus | 22.32 | 11.05 |
| KRH22017 | Soybean | nucleus | 16.38 | 10.98 |
| KRH70661 | Soybean | mitochondrion, nucleus | 22.32 | 10.84 |
| KRH05663 | Soybean | cytosol | 9.89 | 6.02 |
Protein Annotations
| EntrezGene:100807785 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02004247 | EnsemblPlantsGene:GLYMA_07G097700 | UniProt:I1KJ18 |
| InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH48568 | ProteinID:KRH48568 | ProteinID:KRH48568.1 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF96 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI00023390A9 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:9180670..9186248
Molecular Weight (calculated)
40122.7 Da
IEP (calculated)
8.336
GRAVY (calculated)
-0.844
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVVTEHMKW RRPRNQFRHP ISETDDPNPQ IPSIIQSSHS KSTFSSLFSS FSTSNETRDQ NRNNNNKSNR KFSAATFRGF GCTAGASQKV SVPVPAVIRS
101: SADREGKSSR KKKHRRNSNS GNSTSDDDDD DVWCGPGIGF STDAAAASVE CVVARKNVSA RGKLDVVEDR VTHRERSSYF GRRTVKPESF SFLEDEPDIF
201: AARPGLEPFG TARFYRHVPH PSPDGLAEIM ILQGRIMMGG RFDSHDQFRD WRLDVDNMSY EQLLELGERI GYANTGLKED EMGLNIRKVK PSSSNDASKH
301: QLDKKCSVCQ EEYESDDELG RLKCDHSYHF QCIKQWLVHK NFCPVCKQEV VVRH
101: SADREGKSSR KKKHRRNSNS GNSTSDDDDD DVWCGPGIGF STDAAAASVE CVVARKNVSA RGKLDVVEDR VTHRERSSYF GRRTVKPESF SFLEDEPDIF
201: AARPGLEPFG TARFYRHVPH PSPDGLAEIM ILQGRIMMGG RFDSHDQFRD WRLDVDNMSY EQLLELGERI GYANTGLKED EMGLNIRKVK PSSSNDASKH
301: QLDKKCSVCQ EEYESDDELG RLKCDHSYHF QCIKQWLVHK NFCPVCKQEV VVRH
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.