Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G022900.1 | Wheat | nucleus | 93.63 | 94.29 |
| TraesCS2A01G022100.1 | Wheat | nucleus | 93.34 | 94.01 |
| TraesCS2B01G030700.1 | Wheat | nucleus | 92.63 | 93.3 |
| Os04t0185500-01 | Rice | nucleus | 66.43 | 66.15 |
| EES10483 | Sorghum | nucleus | 63.31 | 64.22 |
| Zm00001d004300_P003 | Maize | nucleus | 61.47 | 62.54 |
| Zm00001d025027_P002 | Maize | nucleus | 60.34 | 61.21 |
| PGSC0003DMT400079217 | Potato | cytosol | 8.5 | 60.61 |
| GSMUA_Achr4P06090_001 | Banana | cytosol | 12.04 | 57.82 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 4.53 | 34.78 |
| GSMUA_Achr4P12850_001 | Banana | nucleus | 20.4 | 31.58 |
| Bra015221.1-P | Field mustard | nucleus | 23.09 | 27.3 |
| CDY62314 | Canola | nucleus | 21.81 | 26.01 |
| HORVU2Hr1G113930.2 | Barley | nucleus | 24.08 | 25.99 |
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 21.25 | 25.95 |
| CDY37230 | Canola | nucleus | 21.53 | 25.81 |
| Bra039842.1-P | Field mustard | nucleus | 21.67 | 25.63 |
| GSMUA_Achr9P22530_001 | Banana | nucleus | 23.09 | 25.31 |
| AT4G34040.1 | Thale cress | nucleus | 23.8 | 25.23 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 25.78 | 24.8 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 13.03 | 24.53 |
| HORVU5Hr1G080540.5 | Barley | nucleus | 5.81 | 23.84 |
| KRH50319 | Soybean | nucleus | 23.23 | 22.94 |
| KRH70661 | Soybean | mitochondrion, nucleus | 23.37 | 22.63 |
| PGSC0003DMT400066252 | Potato | nucleus | 22.66 | 22.38 |
| AT2G15530.4 | Thale cress | nucleus | 23.94 | 21.67 |
| Solyc01g107940.2.1 | Tomato | nucleus | 21.53 | 21.5 |
| Solyc01g107930.2.1 | Tomato | nucleus | 21.67 | 21.31 |
| HORVU3Hr1G064370.1 | Barley | plastid | 11.61 | 21.3 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 21.81 | 21.21 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 13.88 | 18.63 |
| HORVU7Hr1G009940.2 | Barley | nucleus | 6.23 | 18.49 |
| HORVU1Hr1G082970.1 | Barley | plastid | 9.63 | 18.04 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 14.73 | 17.75 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 13.46 | 17.69 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 6.52 | 17.36 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 16.57 | 16.83 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 6.94 | 16.39 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 12.04 | 16.35 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 13.6 | 16.3 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 7.79 | 15.9 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 7.08 | 14.2 |
| HORVU3Hr1G054870.1 | Barley | cytosol, mitochondrion | 8.5 | 13.99 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G003340.5 | EnsemblPlantsGene:HORVU2Hr1G003340 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF94 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000B482C41 | UniProt:A0A287GX20 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr2H:+:7266683..7272771
Molecular Weight (calculated)
77012.1 Da
IEP (calculated)
6.859
GRAVY (calculated)
-0.641
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHNRVTMLS SSETCHLGSS SNNQAIDQQG LLPSNPAVDE HNLLPDTLES ENYPHYVLNS HEVGMPSGSM IGQQNTSLSL WDSPGSSSAG FLADHDSLLQ
101: AKREHFAPAL SIGGPLIIEG RRRESSSSLP SHNLNIDLNI NQADQFETGN VDMVQSNGHS GMNTYPLNRG LSNTENVLRR EISPGAIRSS LHSANLFDGT
201: VGQETGGSAS HTVNHFRSSI KRKDVAGSIG ESSSNGSSRN HRQNNNMPLP LLSSHESTAN LNMASVNYGF SYPPMEQLDR NTDTSADDIF SDPYTLSGYL
301: HESERFLRNT RMRISANEYE QSLTNLLPEE SFRCSAHQPA HQQSSFTPVQ PRGVSSSASS QNRPHVPAVA QFSQGLQRHP SNGNFGSRVG NSADTINPRS
401: ASLDPGRSLA RSNLPEPFML GQSLFTTDST NLLSAPGSRS NQQNSSSSST LRAAANAGPQ QVPGSNSSQP SSAARGSADV PRRSSLAVSV SHSRSSSIAL
501: QHRGHSSSSH EIRNHQPGSS ARASLQHYSR AVPPSIDRQN PGYLDLQSFM QSIAASREGS RTVSELRNVV EQIRQGRSAA RLEDFLVDRQ LIRRANLVDR
601: HREMRLDVDN MSYEELLALG ERIGHVSTGL TEEKIMSGLK QWKYLHIALE EPATAIEPCC ICQEDYTDGE DMGRVECGHY FHTECIKQWL VIKNTCPICK
701: KAALAT
101: AKREHFAPAL SIGGPLIIEG RRRESSSSLP SHNLNIDLNI NQADQFETGN VDMVQSNGHS GMNTYPLNRG LSNTENVLRR EISPGAIRSS LHSANLFDGT
201: VGQETGGSAS HTVNHFRSSI KRKDVAGSIG ESSSNGSSRN HRQNNNMPLP LLSSHESTAN LNMASVNYGF SYPPMEQLDR NTDTSADDIF SDPYTLSGYL
301: HESERFLRNT RMRISANEYE QSLTNLLPEE SFRCSAHQPA HQQSSFTPVQ PRGVSSSASS QNRPHVPAVA QFSQGLQRHP SNGNFGSRVG NSADTINPRS
401: ASLDPGRSLA RSNLPEPFML GQSLFTTDST NLLSAPGSRS NQQNSSSSST LRAAANAGPQ QVPGSNSSQP SSAARGSADV PRRSSLAVSV SHSRSSSIAL
501: QHRGHSSSSH EIRNHQPGSS ARASLQHYSR AVPPSIDRQN PGYLDLQSFM QSIAASREGS RTVSELRNVV EQIRQGRSAA RLEDFLVDRQ LIRRANLVDR
601: HREMRLDVDN MSYEELLALG ERIGHVSTGL TEEKIMSGLK QWKYLHIALE EPATAIEPCC ICQEDYTDGE DMGRVECGHY FHTECIKQWL VIKNTCPICK
701: KAALAT
001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
Arabidopsis Description
MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.