Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G113930.2 | Barley | nucleus | 100.0 | 88.38 |
| TraesCS2D01G516000.1 | Wheat | nucleus | 93.43 | 80.72 |
| TraesCS2A01G514400.3 | Wheat | nucleus | 92.91 | 80.27 |
| TraesCS2B01G542200.2 | Wheat | nucleus | 89.97 | 77.61 |
| PGSC0003DMT400079217 | Potato | cytosol | 11.07 | 64.65 |
| Zm00001d026446_P001 | Maize | cytosol | 20.24 | 63.59 |
| Os04t0648800-01 | Rice | nucleus | 72.49 | 62.82 |
| EES11547 | Sorghum | nucleus | 69.03 | 60.45 |
| Zm00001d026445_P001 | Maize | nucleus | 67.47 | 59.54 |
| Zm00001d002080_P002 | Maize | nucleus | 67.99 | 59.28 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 5.88 | 36.96 |
| Bra015221.1-P | Field mustard | nucleus | 27.16 | 26.3 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 32.01 | 25.2 |
| CDY62314 | Canola | nucleus | 24.91 | 24.32 |
| CDY37230 | Canola | nucleus | 24.57 | 24.11 |
| Bra039842.1-P | Field mustard | nucleus | 24.74 | 23.95 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 15.4 | 23.73 |
| KRH50319 | Soybean | nucleus | 29.07 | 23.5 |
| AT4G34040.1 | Thale cress | nucleus | 26.99 | 23.42 |
| PGSC0003DMT400066252 | Potato | nucleus | 28.37 | 22.94 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 28.55 | 22.73 |
| KRH70661 | Soybean | mitochondrion, nucleus | 28.37 | 22.5 |
| Solyc01g107940.2.1 | Tomato | nucleus | 27.34 | 22.35 |
| Solyc01g107930.2.1 | Tomato | nucleus | 27.68 | 22.28 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 25.95 | 21.25 |
| AT2G15530.4 | Thale cress | nucleus | 28.37 | 21.03 |
| HORVU5Hr1G080540.5 | Barley | nucleus | 6.06 | 20.35 |
| HORVU3Hr1G064370.1 | Barley | plastid | 13.32 | 20.0 |
| HORVU1Hr1G082970.1 | Barley | plastid | 12.28 | 18.83 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 17.3 | 18.62 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 16.61 | 18.25 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 7.96 | 17.36 |
| HORVU7Hr1G009940.2 | Barley | nucleus | 6.75 | 16.39 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 16.44 | 16.13 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 14.36 | 15.96 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 8.13 | 15.72 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 15.4 | 15.19 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 8.65 | 14.45 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 17.3 | 14.39 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 7.96 | 13.07 |
| HORVU3Hr1G054870.1 | Barley | cytosol, mitochondrion | 6.92 | 9.32 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G113970.2 | EnsemblPlantsGene:HORVU2Hr1G113970 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF464 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000B484116 | UniProt:A0A287JHT5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr2H:+:730823581..730827301
Molecular Weight (calculated)
62898.3 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.537
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: SGEASSSGNA LNIGGGLRIG ERRLGAEHSL SLDNVDINLN ASGHDLFGQS SNANATSQAS QQNAGCSRAD TTAQATELRL HPYRTFGLDD EQPEPFPSLN
101: AFEHPLGNFS LMPEDIDQRP GSSLDGRRLA CKRKNIEGVH GQFSAGASTS FSHRNDNAFH SVPSSSFNPA PGPNVSSHNF LLAPSSIEEQ LPNYGTTTGM
201: SSVSYNPPSG GNNSSGNSQR SFRARTTTAQ QVSPYGVWPS SGSIRHPGSY YHQAPAFQSA FDELEAAMPV VSGINLQYQH PGNVVPGIPQ TAQRFAGRAA
301: ASSSRAGSLD NIILGREDVR NLVVPSFPNA APHSALNMRH LVPELSNWNP DIPGATIPGN VSSVSRANAT STISRPAGST SIAHQNLHRR HPRNLSEEIG
401: RLSGALRSQQ HPRLRSGFLL ERQGDGVWGV PLPMRNSREG RRLMEIRNAL EMIQRGENVR FESIFYGGVE IHDRHRDMRL DIDNMSYEEL LALEERIGNV
501: STGLTENDVM KLLKQRKFSS WRLSSMEFEP CCICQEDYVE GDDLGTLHCG HDFHASCISQ WLVVKNLCPI CKSTALKT
101: AFEHPLGNFS LMPEDIDQRP GSSLDGRRLA CKRKNIEGVH GQFSAGASTS FSHRNDNAFH SVPSSSFNPA PGPNVSSHNF LLAPSSIEEQ LPNYGTTTGM
201: SSVSYNPPSG GNNSSGNSQR SFRARTTTAQ QVSPYGVWPS SGSIRHPGSY YHQAPAFQSA FDELEAAMPV VSGINLQYQH PGNVVPGIPQ TAQRFAGRAA
301: ASSSRAGSLD NIILGREDVR NLVVPSFPNA APHSALNMRH LVPELSNWNP DIPGATIPGN VSSVSRANAT STISRPAGST SIAHQNLHRR HPRNLSEEIG
401: RLSGALRSQQ HPRLRSGFLL ERQGDGVWGV PLPMRNSREG RRLMEIRNAL EMIQRGENVR FESIFYGGVE IHDRHRDMRL DIDNMSYEEL LALEERIGNV
501: STGLTENDVM KLLKQRKFSS WRLSSMEFEP CCICQEDYVE GDDLGTLHCG HDFHASCISQ WLVVKNLCPI CKSTALKT
001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
Arabidopsis Description
MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.