Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 64.5 | 88.3 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 73.05 | 86.0 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 66.73 | 85.27 |
| VIT_07s0031g00400.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 10.04 | 52.94 |
| KRH26195 | Soybean | nucleus | 41.08 | 48.25 |
| Solyc12g014070.1.1 | Tomato | nucleus | 47.96 | 48.22 |
| KRH55161 | Soybean | nucleus | 40.89 | 48.03 |
| PGSC0003DMT400039631 | Potato | nucleus | 47.58 | 47.76 |
| KRH30071 | Soybean | cytosol | 29.37 | 45.93 |
| KRH22017 | Soybean | nucleus | 44.05 | 44.89 |
| VIT_07s0031g00370.t01 | Wine grape | mitochondrion | 12.08 | 44.83 |
| VIT_16s0022g00290.t01 | Wine grape | nucleus | 6.32 | 44.74 |
| Solyc10g007140.2.1 | Tomato | nucleus | 42.19 | 43.74 |
| PGSC0003DMT400054921 | Potato | nucleus | 41.64 | 43.16 |
| VIT_11s0118g00640.t01 | Wine grape | nucleus | 8.92 | 40.34 |
| VIT_07s0031g00380.t01 | Wine grape | cytosol | 5.2 | 40.0 |
| KRH55165 | Soybean | nucleus | 22.86 | 39.55 |
| CDY26006 | Canola | nucleus | 33.64 | 39.18 |
| KRH55090 | Soybean | nucleus | 26.77 | 38.71 |
| AT1G53190.1 | Thale cress | nucleus | 35.5 | 38.66 |
| CDY25871 | Canola | nucleus | 34.01 | 38.28 |
| CDY24110 | Canola | nucleus | 32.53 | 38.04 |
| Bra039659.1-P | Field mustard | nucleus | 32.53 | 38.04 |
| Bra038109.1-P | Field mustard | nucleus | 33.83 | 37.92 |
| CDY55839 | Canola | nucleus | 34.01 | 37.42 |
| Bra027282.1-P | Field mustard | nucleus | 30.11 | 36.4 |
| CDX75805 | Canola | cytosol | 29.93 | 36.34 |
| CDX97629 | Canola | nucleus | 29.74 | 36.28 |
| AT3G15070.1 | Thale cress | nucleus | 32.71 | 36.21 |
| CDY68521 | Canola | nucleus | 29.55 | 36.05 |
| Bra001582.1-P | Field mustard | nucleus | 29.18 | 35.93 |
| CDX82450 | Canola | nucleus | 29.37 | 35.27 |
| VIT_07s0031g00440.t01 | Wine grape | nucleus | 11.71 | 28.64 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 27.51 | 27.11 |
| Solyc07g062720.1.1 | Tomato | nucleus | 37.55 | 26.06 |
| PGSC0003DMT400032385 | Potato | nucleus | 37.73 | 25.0 |
| VIT_07s0031g00390.t01 | Wine grape | nucleus | 11.34 | 25.0 |
| EES03404 | Sorghum | nucleus | 24.16 | 24.95 |
| VIT_18s0001g02280.t01 | Wine grape | nucleus | 9.48 | 24.64 |
| Os01t0667700-02 | Rice | nucleus | 23.42 | 24.05 |
| VIT_13s0019g04100.t01 | Wine grape | extracellular | 24.91 | 23.72 |
| Zm00001d011541_P004 | Maize | nucleus | 23.05 | 23.4 |
| KXG22536 | Sorghum | nucleus | 21.75 | 23.03 |
| Zm00001d009571_P002 | Maize | nucleus | 21.75 | 22.85 |
| Os05t0564300-01 | Rice | nucleus | 21.19 | 22.8 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 14.68 | 22.51 |
| VIT_06s0004g01930.t01 | Wine grape | nucleus | 10.41 | 22.22 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 21.75 | 22.2 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 21.75 | 22.16 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 21.75 | 22.16 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 21.19 | 21.67 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 8.74 | 21.46 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 14.68 | 21.29 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 20.07 | 20.77 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 20.26 | 20.22 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 19.52 | 20.04 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 20.26 | 19.89 |
| VIT_13s0064g01030.t01 | Wine grape | nucleus | 9.11 | 19.84 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 11.34 | 19.81 |
| VIT_18s0001g10260.t01 | Wine grape | nucleus | 26.95 | 19.75 |
| Zm00001d039015_P002 | Maize | cytosol | 13.2 | 17.36 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 22.68 | 16.62 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 15.99 | 15.64 |
Protein Annotations
| EntrezGene:100264059 | wikigene:100264059 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:AM479548 | ProteinID:CAN79595 |
| ProteinID:CAN79595.1 | ProteinID:CCB46288 | ProteinID:CCB46288.1 | UniProt:F6H1Z2 | EMBL:FN595229 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR001841 | InterPro:IPR013083 | EntrezGene:LOC100264059 | wikigene:LOC100264059 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00021097EC | ArrayExpress:VIT_19s0014g01850 | EnsemblPlantsGene:VIT_19s0014g01850 | EnsemblPlants:VIT_19s0014g01850.t01 | unigene:Vvi.3829 | RefSeq:XP_002282878 |
| RefSeq:XP_002282878.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
No Description!
Coordinates
chr19:-:2035536..2041782
Molecular Weight (calculated)
58577.7 Da
IEP (calculated)
6.793
GRAVY (calculated)
-0.524
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MMCTGQMIDL QMDERNQGHH VISVTNFPQP NMHSMLSAPG NSSNFDVRHL PEHYDGSAMF YGIGQYNGVQ HHHPVPSLDI GVAPGSNIYN PYLTPSSGNR
101: GFPVSINHGP SDQLPSSSNH GVIGVSTDEY GRENHFMDGV RGACKRKNAE GILGNFQYIN GLASSSSSVP PFNTRHLESG VSMMDSASFA QPQYRGNNAP
201: SIMEVGSHRS VRNRSGAVGL DSVLAHNHNH LVQGNYIGHP FQPSGNPWVD QQSGNNGSDG GTLAWNHGPA LPYLHGSNIS GGSREAGNVG IQGYHDTSSG
301: RSSTNYLQPP VLHRPHTLHY PPPPPPPMQG ARSHFHPQVV ASSYRLPTIS SRGPVPPQVG VEAGPRHPGP VPPTGIRIYR SNRGGVAPEA TSRHHNLPYL
401: RMLPAEEVAI LDLSAFYEVG DLIDHHRDMR LDIEDMSYEE LLALGERIGH VSTGLSEESI TNCLKTRTYI SSTCLNLEEA ASMDLENDSC IICQEEYRNQ
501: EKIGFLDCGH EYHAGCLKKW LLVKNVCPIC KAPAMTPK
101: GFPVSINHGP SDQLPSSSNH GVIGVSTDEY GRENHFMDGV RGACKRKNAE GILGNFQYIN GLASSSSSVP PFNTRHLESG VSMMDSASFA QPQYRGNNAP
201: SIMEVGSHRS VRNRSGAVGL DSVLAHNHNH LVQGNYIGHP FQPSGNPWVD QQSGNNGSDG GTLAWNHGPA LPYLHGSNIS GGSREAGNVG IQGYHDTSSG
301: RSSTNYLQPP VLHRPHTLHY PPPPPPPMQG ARSHFHPQVV ASSYRLPTIS SRGPVPPQVG VEAGPRHPGP VPPTGIRIYR SNRGGVAPEA TSRHHNLPYL
401: RMLPAEEVAI LDLSAFYEVG DLIDHHRDMR LDIEDMSYEE LLALGERIGH VSTGLSEESI TNCLKTRTYI SSTCLNLEEA ASMDLENDSC IICQEEYRNQ
501: EKIGFLDCGH EYHAGCLKKW LLVKNVCPIC KAPAMTPK
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.