Factsheet for VIT_07s0031g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g00400.t01	Wine grape	cytoskeleton, cytosol, nucleus	87.14	59.8
VIT_16s0022g00290.t01	Wine grape	nucleus	47.14	43.42
VIT_07s0031g00370.t01	Wine grape	mitochondrion	74.29	35.86
VIT_11s0118g00640.t01	Wine grape	nucleus	44.29	26.05
VIT_07s0031g00390.t01	Wine grape	nucleus	80.0	22.95
VIT_07s0031g00440.t01	Wine grape	nucleus	57.14	18.18
PGSC0003DMT400095772	Potato	cytosol	34.29	12.9
Solyc09g007620.1.1	Tomato	nucleus	31.43	12.57
VIT_18s0001g02280.t01	Wine grape	nucleus	30.0	10.14
VIT_17s0000g03210.t01	Wine grape	nucleus	51.43	9.7
VIT_12s0028g01220.t01	Wine grape	nucleus	28.57	9.13
VIT_06s0004g01930.t01	Wine grape	nucleus	32.86	9.13
VIT_01s0011g04080.t01	Wine grape	nucleus	42.86	8.55
VIT_13s0064g01030.t01	Wine grape	nucleus	27.14	7.69
VIT_10s0042g00580.t01	Wine grape	nucleus	31.43	7.14
VIT_03s0088g00930.t01	Wine grape	nucleus, plastid	35.71	6.36
VIT_03s0097g00680.t01	Wine grape	nucleus	35.71	5.94
VIT_08s0040g02160.t01	Wine grape	nucleus	45.71	5.86
VIT_04s0008g02390.t01	Wine grape	nucleus	44.29	5.64
VIT_03s0088g01090.t01	Wine grape	nucleus	35.71	5.47
VIT_03s0063g00160.t01	Wine grape	nucleus	55.71	5.31
VIT_13s0019g04100.t01	Wine grape	extracellular	42.86	5.31
VIT_19s0014g01850.t01	Wine grape	nucleus	40.0	5.2
VIT_18s0001g10260.t01	Wine grape	nucleus	50.0	4.77

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	ProteinID:CCB47058	ProteinID:CCB47058.1	UniProt:F6H4J4	EMBL:FN595233
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0061630
InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF464
SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI00021086FF	ArrayExpress:VIT_07s0031g00380	EnsemblPlantsGene:VIT_07s0031g00380	EnsemblPlants:VIT_07s0031g00380.t01
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	:	:	:	:

Description

No Description!

Coordinates

chr7:+:16612579..16612919

Molecular Weight (calculated)

7835.2 Da

IEP (calculated)

4.712

GRAVY (calculated)

-0.350

Length

70 amino acids

Sequence
(BLAST)

1: MAKMEKWKYS CSTTGHSVDA ETCCICLEEY ADDDDVGKLD CGHEYHVACI KEWLVQKNSC PICKNTALAT

Best Arabidopsis Sequence Match ( AT4G34040.1 )
(BLAST)

001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST

Arabidopsis Description

MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.