CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0571200-01	Rice	nucleus	74.9	72.83
TraesCS2B01G418300.1	Wheat	cytosol	71.66	69.96
TraesCS2A01G400200.1	Wheat	nucleus	70.85	69.17
TraesCS2D01G397800.1	Wheat	cytosol	68.83	66.15
HORVU2Hr1G094980.4	Barley	cytosol	70.04	65.28
Zm00001d002624_P003	Maize	cytosol	86.23	63.39
EER99218	Sorghum	nucleus	32.39	45.71
VIT_12s0028g01220.t01	Wine grape	nucleus	34.01	38.36
GSMUA_Achr4P30500_001	Banana	nucleus	52.63	38.35
OQU80744	Sorghum	mitochondrion	20.65	35.42
Solyc03g026150.2.1	Tomato	nucleus	33.2	34.6
PGSC0003DMT400037132	Potato	nucleus	33.2	34.31
KXG40075	Sorghum	cytosol	33.6	33.33
KXG19166	Sorghum	nucleus	34.01	30.88
CDX91624	Canola	nucleus	22.67	25.45
CDY27083	Canola	nucleus	22.27	25.11
AT5G52150.1	Thale cress	cytosol, nucleus, peroxisome	20.24	25.0
Bra022579.1-P	Field mustard	cytosol	12.96	24.24
EES15239	Sorghum	nucleus	30.36	23.89
EER97094	Sorghum	nucleus	30.77	23.46
AT5G52140.1	Thale cress	nucleus	25.1	22.14
CDY00512	Canola	nucleus	23.48	21.25
Bra022580.1-P	Field mustard	cytosol	15.38	21.11
AT5G52155.1	Thale cress	nucleus	15.38	20.88
CDY31919	Canola	nucleus	23.08	20.88
CDX91625	Canola	cytosol	19.03	20.52
CDY27082	Canola	cytosol	18.62	19.33
Bra028293.1-P	Field mustard	nucleus	15.38	15.9
OQU87370	Sorghum	nucleus	17.81	12.61
EES18624	Sorghum	cytosol, mitochondrion, nucleus, plastid	18.62	12.23
OQU80147	Sorghum	nucleus	17.41	12.01
EES12797	Sorghum	nucleus	17.41	11.5
KXG22536	Sorghum	nucleus	21.05	10.24
EES03404	Sorghum	nucleus	20.65	9.79
EES04530	Sorghum	nucleus	19.84	9.46
EES19093	Sorghum	nucleus	20.24	9.29
EES00281	Sorghum	nucleus	18.22	8.74
EES10483	Sorghum	nucleus	22.27	7.9
EES11547	Sorghum	nucleus	20.24	7.58
KXG20741	Sorghum	nucleus	17.41	7.29

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:8057608	InterPro:BB	UniProt:C5YE43	EnsemblPlants:EES11283
ProteinID:EES11283	ProteinID:EES11283.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0006464	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007
GO:GO:0043161	GO:GO:0046621	GO:GO:0048437	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083
PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF75	SMART:SM00184	EnsemblPlantsGene:SORBI_3006G184200
SUPFAM:SSF57850	UniParc:UPI0001A86D4C	RefSeq:XP_002446955.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:53926286..53930515

Molecular Weight (calculated)

27606.4 Da

IEP (calculated)

4.918

GRAVY (calculated)

-0.662

Length

247 amino acids

Sequence
(BLAST)

001: MYLLGKKTGK KKVYLGYMSA PLPYAIEENY GGCFFDDDDD LAQVLQDQEI LYQLIQGSNG SGSSRTHLTP SCSYGHDRTP NERKSSEDVN YELQLAVDEA
101: LARELQEMEG KLANTSLNDN NGRKPTSSSL FDRGNNSASR PPQAVEEDGI DPDNMTYEEL QQLGEAIGTE SKGLPESVIA LLPTSTYKIG IFSRKEKHEE
201: CVICCMSYKN RDRLTKLPCG HQYHQACVAK WLQINKVCPV CNKEVFS

Best Arabidopsis Sequence Match ( AT3G63530.1 )
(BLAST)

001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH

Arabidopsis Description

BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.