Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P20060_001 | Banana | cytosol | 25.0 | 45.45 |
| GSMUA_Achr6P34110_001 | Banana | plasma membrane | 57.0 | 14.62 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 50.0 | 13.19 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 49.0 | 12.89 |
| TraesCS4B01G141600.1 | Wheat | plasma membrane | 49.0 | 12.73 |
| GSMUA_Achr9P20880_001 | Banana | plasma membrane | 40.0 | 12.42 |
| Os11t0704800-01 | Rice | plasma membrane | 46.0 | 12.3 |
| GSMUA_Achr2P03320_001 | Banana | cytosol, golgi, plasma membrane | 39.0 | 12.15 |
| GSMUA_Achr11P... | Banana | cytosol | 40.0 | 11.9 |
| GSMUA_Achr1P07920_001 | Banana | plasma membrane | 38.0 | 11.84 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 46.0 | 11.47 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 48.0 | 11.14 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 51.0 | 10.16 |
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 27.0 | 8.52 |
| GSMUA_Achr2P08240_001 | Banana | plasma membrane | 13.0 | 3.55 |
| GSMUA_Achr5P20070_001 | Banana | plasma membrane | 0.0 | 0.0 |
| GSMUA_Achr10P... | Banana | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P03560_001 | EnsemblPlants:GSMUA_Achr10T03560_001 | EnsemblPlantsGene:GSMUA_Achr10G03560_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 |
| GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:Peptidase_S54_rhomboid | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF61 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000296AA39 | UniProt:M0RF33 | MapMan:35.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G03560_001]
Coordinates
chr10:+:11804034..11804336
Molecular Weight (calculated)
10996.2 Da
IEP (calculated)
7.252
GRAVY (calculated)
-0.219
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MGREAASSEI DNTVGHLEPN PDVTPDPPPT PLTRPPYRRW TPWLVPAIVV ANLALFAVTM YVNDCPKKNN YLGNCVGLFL GRFAFQPLKE NPLFGPSSST
001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK VAKSSLVKQA ALSMNDVSIM SLVFLHLQFA ALLTLIFIIA INLAVGILPH VDNFAHLGGF TSGFLLGFVF LIRPQYGYFN
301: QRNNPRGYAA PSAKSKHKPY QYVLWITSLV LLIAGYTSFS FIMITK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK VAKSSLVKQA ALSMNDVSIM SLVFLHLQFA ALLTLIFIIA INLAVGILPH VDNFAHLGGF TSGFLLGFVF LIRPQYGYFN
301: QRNNPRGYAA PSAKSKHKPY QYVLWITSLV LLIAGYTSFS FIMITK
Arabidopsis Description
RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.