Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- plastid 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 81.04 | 98.42 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 96.88 | 98.16 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 95.32 | 96.83 |
| Os11t0704800-01 | Rice | plasma membrane | 82.08 | 84.49 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 76.36 | 68.21 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 70.65 | 67.83 |
| TraesCS5B01G314900.1 | Wheat | plasma membrane | 50.39 | 60.06 |
| GSMUA_Achr6P34110_001 | Banana | plasma membrane | 60.52 | 59.74 |
| KRG99546 | Soybean | plasma membrane | 57.66 | 57.81 |
| GSMUA_Achr10P... | Banana | plasma membrane | 36.1 | 56.97 |
| KRH66050 | Soybean | plasma membrane | 56.88 | 56.88 |
| VIT_06s0004g04890.t01 | Wine grape | plasma membrane | 57.66 | 56.78 |
| VIT_08s0007g00470.t01 | Wine grape | plasma membrane | 56.88 | 56.44 |
| TraesCS7B01G168100.1 | Wheat | plasma membrane | 47.53 | 55.79 |
| CDY47879 | Canola | plasma membrane | 55.06 | 55.64 |
| KRH10251 | Soybean | plasma membrane | 55.84 | 55.27 |
| KRH23080 | Soybean | plasma membrane | 56.1 | 55.1 |
| CDY39528 | Canola | plasma membrane | 54.81 | 55.09 |
| TraesCS1B01G196600.1 | Wheat | plasma membrane | 46.23 | 54.6 |
| AT2G29050.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 55.06 | 54.5 |
| TraesCS4B01G356600.1 | Wheat | plasma membrane | 45.97 | 52.99 |
| Bra028389.1-P | Field mustard | plasma membrane | 54.81 | 52.88 |
| CDX78204 | Canola | plasma membrane | 53.25 | 52.43 |
| CDY65838 | Canola | plasma membrane | 53.25 | 52.43 |
| KRG99955 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 53.77 | 52.27 |
| CDY30844 | Canola | cytosol, peroxisome, plasma membrane | 52.73 | 51.92 |
| TraesCS3B01G085300.1 | Wheat | plasma membrane | 50.39 | 51.87 |
| CDX76189 | Canola | cytosol, peroxisome, plasma membrane | 52.47 | 51.66 |
| AT3G53780.2 | Thale cress | plasma membrane | 52.73 | 51.52 |
| TraesCS2B01G419100.1 | Wheat | plasma membrane | 45.19 | 51.48 |
| KRH49106 | Soybean | plasma membrane | 35.58 | 51.12 |
| CDX73525 | Canola | plasma membrane | 52.99 | 50.75 |
| GSMUA_Achr10P... | Banana | cytosol | 12.73 | 49.0 |
| Bra014862.1-P | Field mustard | cytosol | 51.17 | 46.46 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR035952 | PFAM:PF01694 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF61 | InterPro:Peptidase_S54_rhomboid |
| InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | SUPFAM:SSF144091 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G141600 | EnsemblPlants:TraesCS4B01G141600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:187017123..187020799
Molecular Weight (calculated)
41926.9 Da
IEP (calculated)
9.973
GRAVY (calculated)
0.433
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKPAGAGAG PGPGPGTGAV EVRVERPQRP PVHHPNTARL RARPYYRRWT PWLVPAASIA CVAVFLVTMF VNDCPNRSAG NCTAGFLGRF AFQPLKENPL
101: LGPSSTTLLK MGALDVSKVV QGRQGWRLIT CIWLHAGVVH LLINVLCLLF IGIRLEQEFG FVRIGLVYLI SGFGGSLMSA LFIRASISVG ASGALFGLIG
201: SMLSELITNW SLYANKVAAL LTLVLVIVVN LALGILPRVD NFAHIGGLIS GFLLGFVVFI RPQFAWINQR RVAPGPHAAP AERKHKTYQY ILWIVAAILL
301: IVGFTVAIVL LFRGYNANDH CSWCHYLSCV PTKKWKCNSS PTTCTAMLQG NTLNFTCEGK GIHRSYIVAE ATQDKIDQLC NQLCS
101: LGPSSTTLLK MGALDVSKVV QGRQGWRLIT CIWLHAGVVH LLINVLCLLF IGIRLEQEFG FVRIGLVYLI SGFGGSLMSA LFIRASISVG ASGALFGLIG
201: SMLSELITNW SLYANKVAAL LTLVLVIVVN LALGILPRVD NFAHIGGLIS GFLLGFVVFI RPQFAWINQR RVAPGPHAAP AERKHKTYQY ILWIVAAILL
301: IVGFTVAIVL LFRGYNANDH CSWCHYLSCV PTKKWKCNSS PTTCTAMLQG NTLNFTCEGK GIHRSYIVAE ATQDKIDQLC NQLCS
001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
Arabidopsis Description
RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [golgi,plasma membrane,peroxisome,plastid]
SUBAcon: [golgi,plasma membrane,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.