Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99955 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 79.85 | 54.04 |
| Os01t0147300-01 | Rice | plasma membrane | 33.58 | 44.12 |
| VIT_08s0007g00470.t01 | Wine grape | plasma membrane | 62.31 | 43.04 |
| KRG99546 | Soybean | plasma membrane | 61.57 | 42.97 |
| KRH66050 | Soybean | plasma membrane | 61.57 | 42.86 |
| PGSC0003DMT400022764 | Potato | plasma membrane | 58.58 | 40.67 |
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 47.76 | 40.38 |
| Solyc09g010880.2.1 | Tomato | extracellular | 57.46 | 40.21 |
| KRG91456 | Soybean | cytosol, golgi, plasma membrane | 48.13 | 39.21 |
| KRH09112 | Soybean | plasma membrane | 47.76 | 38.91 |
| TraesCS3D01G070700.1 | Wheat | mitochondrion, plasma membrane | 44.03 | 38.69 |
| KRH38564 | Soybean | plasma membrane | 47.39 | 38.48 |
| KRH35359 | Soybean | cytosol, golgi, plasma membrane | 47.01 | 38.18 |
| KRH10251 | Soybean | plasma membrane | 53.73 | 37.02 |
| Os11t0704800-01 | Rice | plasma membrane | 51.49 | 36.9 |
| TraesCS3B01G085300.1 | Wheat | plasma membrane | 51.12 | 36.63 |
| TraesCS3A01G071500.1 | Wheat | plasma membrane | 50.75 | 36.36 |
| CDY30844 | Canola | cytosol, peroxisome, plasma membrane | 52.61 | 36.06 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 51.12 | 36.05 |
| KRH23080 | Soybean | plasma membrane | 52.61 | 35.97 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 50.75 | 35.88 |
| CDY65838 | Canola | plasma membrane | 52.24 | 35.81 |
| CDX78204 | Canola | plasma membrane | 52.24 | 35.81 |
| CDX76189 | Canola | cytosol, peroxisome, plasma membrane | 52.24 | 35.81 |
| TraesCS4B01G141600.1 | Wheat | plasma membrane | 51.12 | 35.58 |
| AT3G53780.2 | Thale cress | plasma membrane | 51.49 | 35.03 |
| CDX73525 | Canola | plasma membrane | 51.12 | 34.08 |
| Bra014862.1-P | Field mustard | cytosol | 52.61 | 33.25 |
| KRH09741 | Soybean | plasma membrane | 39.18 | 33.23 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 49.25 | 32.92 |
| EES00318 | Sorghum | golgi, peroxisome, plasma membrane | 50.75 | 32.3 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 49.63 | 30.86 |
| Zm00001d039870_P002 | Maize | plasma membrane | 50.37 | 26.89 |
| KRH64762 | Soybean | plasma membrane | 35.45 | 25.82 |
| KRH53148 | Soybean | plasma membrane | 35.82 | 25.74 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | UniProt:A0A0R0J795 | EMBL:ACUP02004331 | EnsemblPlantsGene:GLYMA_07G132800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR035952 |
| EnsemblPlants:KRH49106 | ProteinID:KRH49106 | ProteinID:KRH49106.1 | PFAM:PF01694 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF38 |
| InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | SUPFAM:SSF144091 | TMHMM:TMhelix | UniParc:UPI0006EDC53D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:15717734..15720827
Molecular Weight (calculated)
29958.6 Da
IEP (calculated)
9.034
GRAVY (calculated)
0.717
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLVIPFFV IANVIVFIIT MLRNMGALDV NKVVHRHQGW RLITCMWLHG GIFHLLANMF GLLVIGIRLE KEFGFACFLL FSLGKESLLV LLVLFFDLLG
101: GMLSELLTNW SLYEKKLGAL FIAINLAVGV LPHVDNFAHI GGFLSGFLVG FVFLIRPQFG WIKQRNAPQP HSPTLIKSKF NKYQCISWIL ALILLIFGFT
201: TGLISLLRCV DANDYCSWCH YLSCIPTSRW NCNPKASSSV VVSICAEISS SELPVSKELG VKKKQCSS
101: GMLSELLTNW SLYEKKLGAL FIAINLAVGV LPHVDNFAHI GGFLSGFLVG FVFLIRPQFG WIKQRNAPQP HSPTLIKSKF NKYQCISWIL ALILLIFGFT
201: TGLISLLRCV DANDYCSWCH YLSCIPTSRW NCNPKASSSV VVSICAEISS SELPVSKELG VKKKQCSS
001: MANRDVERVG KKNRGANNNY FYEESSGETH WTSWLIPAIV VANLAVFIAV MFVNDCPKKI TGPNKECVAR FLGRFSFQPL KENPLFGPSS STLEKMGALE
101: WRKVVHEHQG WRLLSCMWLH AGIIHLLTNM LSLIFIGIRL EQQFGFIRVG LIYLISGLGG SILSSLFLQE SISVGASGAL FGLLGAMLSE LLTNWTIYAN
201: KAAALITLLF IIAINLALGM LPRVDNFAHI GGFLTGFCLG FVLLVRPQYG WEASRTNTSR TKRKYSMYQY VLFVVSVVLL VVGLTVALVM LFKGENGNKH
301: CKWCHYLSCF PTSKWTC
101: WRKVVHEHQG WRLLSCMWLH AGIIHLLTNM LSLIFIGIRL EQQFGFIRVG LIYLISGLGG SILSSLFLQE SISVGASGAL FGLLGAMLSE LLTNWTIYAN
201: KAAALITLLF IIAINLALGM LPRVDNFAHI GGFLTGFCLG FVLLVRPQYG WEASRTNTSR TKRKYSMYQY VLFVVSVVLL VVGLTVALVM LFKGENGNKH
301: CKWCHYLSCF PTSKWTC
Arabidopsis Description
RBL2RHOMBOID-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN1]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.