CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53148	Soybean	plasma membrane	95.65	94.37
VIT_18s0001g04400.t01	Wine grape	plasma membrane	52.17	56.14
Solyc11g013320.1.1	Tomato	plasma membrane	55.71	53.25
Bra015649.1-P	Field mustard	plasma membrane	53.26	50.78
CDX87497	Canola	plasma membrane	53.26	50.78
AT1G77860.2	Thale cress	nucleus, peroxisome, plasma membrane	52.17	49.87
CDX88394	Canola	plasma membrane	52.45	49.74
PGSC0003DMT400016755	Potato	cytosol	50.27	48.18
KRH38564	Soybean	plasma membrane	38.32	42.73
KRH09112	Soybean	plasma membrane	38.04	42.55
KRG91456	Soybean	cytosol, golgi, plasma membrane	37.5	41.95
KRH35359	Soybean	cytosol, golgi, plasma membrane	36.68	40.91
KRH10251	Soybean	plasma membrane	41.58	39.33
KRH23080	Soybean	plasma membrane	41.85	39.29
KRG99546	Soybean	plasma membrane	39.13	37.5
KRH66050	Soybean	plasma membrane	39.13	37.4
KRH09741	Soybean	plasma membrane	31.79	37.03
KRG99955	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	39.13	36.36
KRH49106	Soybean	plasma membrane	25.82	35.45

Protein Annotations

Gene3D:1.20.1540.10	EntrezGene:100793747	MapMan:19.4.2.6	EMBL:ACUP02002775	EnsemblPlantsGene:GLYMA_04G254500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR035952
UniProt:K7KM97	EnsemblPlants:KRH64762	ProteinID:KRH64762	ProteinID:KRH64762.1	PFAM:PF01694	PANTHER:PTHR22936
PANTHER:PTHR22936:SF39	InterPro:Peptidase_S54_rhomboid	InterPro:Peptidase_S54_rhomboid_dom	InterPro:Rhomboid-like_sf	SUPFAM:SSF144091	TMHMM:TMhelix
UniParc:UPI000233A66D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:52119722..52122612

Molecular Weight (calculated)

40911.5 Da

IEP (calculated)

8.328

GRAVY (calculated)

0.484

Length

368 amino acids

Sequence
(BLAST)

001: MAECIDVKLS PAPDQRIPLM RSRRGRRRGD TWVVSVFVII QIGVFIATML VNDCWNNSHG DCVLQPLGRF SFQPLPENPL LGPSQSKLDE MGALRWNLLT
101: EHHQTWRLFT FPFLHAGLFH LLLNLSSVIY VGVNLEHHFG PIRIGIIYAL SAFVGSLVAS LFLQNIPAVG ASGALYGLLG TLLSELVWNW KFHSNKISAI
201: ASLVFVFVCN FVLGFLPYVD NFASMGGFIS GFLLGSVFLL CPQIQPVAPN KGGLIDYGVK SYVKLKLKEK LDRPVLRIVS LILFSLLLAG CLVAVLHGIN
301: ISSYCTWCPY VDCIPFTSWH CKDTETSCET MVSNAQLTMT CIGNGNFRVF PFTNISRARF NDLCNLIC

Best Arabidopsis Sequence Match ( AT1G77860.2 )
(BLAST)

001: MEVPTESKTT QIDEISHNLS FTTSNAGDSS WDKISFFRHR SRQIKRDTWL VSVFVLLQIV LFAVTMGVND CSGNSHGHCS AKLLGRFSFQ SLSENPMLGP
101: SASTLEHMGG LSWKALTENH EIWRILTSPW LHSGLFHLFI NLGSLIFVGI YMEQQFGPLR IAVIYFLSGI MGSLFAVLFV RNIPSISSGA AFFGLIGAML
201: SALAKNWNLY NSKISALAII FTIFTVNFLI GFLPFIDNFA NIGGFISGFL LGFVLLFKPQ LRQMPPSHKG KLFEDDMNRS TRLKEQFDRP VLRIICLLVF
301: CGILAGVLLA ACWGVNLNRH CHWCRYVDCV PTKKWSCSDM TTSCEAMVSD AQLTLTCMAN GKFRIFPFTN ISQARTEDLC TLVCS

Arabidopsis Description

KOMRhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178W8L8]
SUBAcon: [peroxisome,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.