Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10251 | Soybean | plasma membrane | 92.86 | 93.57 |
| VIT_06s0004g04890.t01 | Wine grape | plasma membrane | 71.94 | 72.12 |
| CDY47879 | Canola | plasma membrane | 64.29 | 66.14 |
| GSMUA_Achr5P20060_001 | Banana | cytosol | 9.18 | 65.45 |
| CDY39528 | Canola | plasma membrane | 63.78 | 65.27 |
| AT2G29050.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 64.29 | 64.78 |
| GSMUA_Achr5P20070_001 | Banana | plasma membrane | 33.42 | 63.9 |
| Bra028389.1-P | Field mustard | plasma membrane | 64.03 | 62.91 |
| KRG91456 | Soybean | cytosol, golgi, plasma membrane | 52.04 | 62.01 |
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 49.49 | 61.2 |
| KRH09112 | Soybean | plasma membrane | 51.28 | 61.09 |
| KRH66050 | Soybean | plasma membrane | 59.95 | 61.04 |
| KRH35359 | Soybean | cytosol, golgi, plasma membrane | 51.28 | 60.91 |
| KRH38564 | Soybean | plasma membrane | 51.28 | 60.91 |
| KRG99546 | Soybean | plasma membrane | 59.44 | 60.68 |
| TraesCS3D01G070700.1 | Wheat | mitochondrion, plasma membrane | 45.92 | 59.02 |
| Os01t0147300-01 | Rice | plasma membrane | 30.36 | 58.33 |
| Os11t0704800-01 | Rice | plasma membrane | 55.61 | 58.29 |
| TraesCS3B01G085300.1 | Wheat | plasma membrane | 54.85 | 57.49 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 55.36 | 57.26 |
| TraesCS3A01G071500.1 | Wheat | plasma membrane | 54.59 | 57.22 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 55.1 | 56.84 |
| TraesCS4B01G141600.1 | Wheat | plasma membrane | 55.1 | 56.1 |
| KRG99955 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 54.85 | 54.29 |
| KRH49106 | Soybean | plasma membrane | 35.97 | 52.61 |
| EES00318 | Sorghum | golgi, peroxisome, plasma membrane | 55.36 | 51.54 |
| KRH09741 | Soybean | plasma membrane | 41.07 | 50.95 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 51.53 | 50.37 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 53.83 | 48.96 |
| Zm00001d039870_P002 | Maize | plasma membrane | 57.65 | 45.02 |
| KRH53148 | Soybean | plasma membrane | 40.31 | 42.36 |
| KRH64762 | Soybean | plasma membrane | 39.29 | 41.85 |
Protein Annotations
| Gene3D:1.20.1540.10 | EntrezGene:100790951 | MapMan:19.4.2.6 | EMBL:ACUP02008457 | EnsemblPlantsGene:GLYMA_13G336700 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR035952 |
| UniProt:K7M3E7 | EnsemblPlants:KRH23080 | ProteinID:KRH23080 | ProteinID:KRH23080.1 | PFAM:PF01694 | PANTHER:PTHR22936 |
| PANTHER:PTHR22936:SF46 | InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | SUPFAM:SSF144091 | TMHMM:TMhelix |
| UniParc:UPI0001BA88FE | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:43001195..43005070
Molecular Weight (calculated)
43457.2 Da
IEP (calculated)
9.051
GRAVY (calculated)
0.381
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRDPSSATV EVQIHPRCDT TTVHPGRGRR HSPSPPSPPA VHDRDFSLFK RWFPWLVPTF VVANIVVFIV TMYINDCPNH SFYGSCVASF LGRFSFQPLK
101: ENPLLGPSSS TLEKMGALEV GKVIHGHQVW RLFSCIWLHG GVVHVLANML SLVFIGIRLE QEFGFVRIGF LYVISGFGGS LLSALFIQEG ISVGASGALF
201: GLLGGMLSEL LINWTIYANK FAALLTLIVI VVINLAIGVL PHVDNFAHIG GFVSGFFLGF IFLIRPQFKW VSSRHRNSHS TAAAPSVKYK HKPYQYALWV
301: ISFILLIAGL VTGLVLLLRG VNLNDRCSWC HYLSCVPTSK WSCKSQQLYC ESTQIRNQLN ITCLSNGRSH MFPLSDISSL EAQQQLCSQL CS
101: ENPLLGPSSS TLEKMGALEV GKVIHGHQVW RLFSCIWLHG GVVHVLANML SLVFIGIRLE QEFGFVRIGF LYVISGFGGS LLSALFIQEG ISVGASGALF
201: GLLGGMLSEL LINWTIYANK FAALLTLIVI VVINLAIGVL PHVDNFAHIG GFVSGFFLGF IFLIRPQFKW VSSRHRNSHS TAAAPSVKYK HKPYQYALWV
301: ISFILLIAGL VTGLVLLLRG VNLNDRCSWC HYLSCVPTSK WSCKSQQLYC ESTQIRNQLN ITCLSNGRSH MFPLSDISSL EAQQQLCSQL CS
001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
Arabidopsis Description
RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.