Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66050 | Soybean | plasma membrane | 94.53 | 94.29 |
| VIT_08s0007g00470.t01 | Wine grape | plasma membrane | 75.0 | 74.23 |
| Solyc09g010880.2.1 | Tomato | extracellular | 66.67 | 66.84 |
| PGSC0003DMT400022764 | Potato | plasma membrane | 66.67 | 66.32 |
| Os01t0147300-01 | Rice | plasma membrane | 34.64 | 65.2 |
| KRG99955 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 66.67 | 64.65 |
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 53.12 | 64.35 |
| KRH49106 | Soybean | plasma membrane | 42.97 | 61.57 |
| KRH09112 | Soybean | plasma membrane | 51.82 | 60.49 |
| KRH10251 | Soybean | plasma membrane | 60.42 | 59.64 |
| KRG91456 | Soybean | cytosol, golgi, plasma membrane | 51.04 | 59.57 |
| KRH23080 | Soybean | plasma membrane | 60.68 | 59.44 |
| KRH35359 | Soybean | cytosol, golgi, plasma membrane | 51.04 | 59.39 |
| Os11t0704800-01 | Rice | plasma membrane | 57.81 | 59.36 |
| KRH38564 | Soybean | plasma membrane | 50.78 | 59.09 |
| TraesCS3D01G070700.1 | Wheat | mitochondrion, plasma membrane | 46.61 | 58.69 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 57.55 | 58.16 |
| TraesCS3B01G085300.1 | Wheat | plasma membrane | 56.51 | 58.02 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 57.03 | 57.78 |
| TraesCS4B01G141600.1 | Wheat | plasma membrane | 57.81 | 57.66 |
| TraesCS3A01G071500.1 | Wheat | plasma membrane | 55.99 | 57.49 |
| AT3G53780.2 | Thale cress | plasma membrane | 58.59 | 57.11 |
| CDY65838 | Canola | plasma membrane | 56.25 | 55.24 |
| CDX78204 | Canola | plasma membrane | 56.25 | 55.24 |
| CDY30844 | Canola | cytosol, peroxisome, plasma membrane | 55.73 | 54.73 |
| CDX76189 | Canola | cytosol, peroxisome, plasma membrane | 55.73 | 54.73 |
| EES00318 | Sorghum | golgi, peroxisome, plasma membrane | 59.64 | 54.39 |
| CDX73525 | Canola | plasma membrane | 56.25 | 53.73 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 54.69 | 52.37 |
| KRH09741 | Soybean | plasma membrane | 41.67 | 50.63 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 56.51 | 50.35 |
| Bra014862.1-P | Field mustard | cytosol | 55.21 | 50.0 |
| Zm00001d039870_P002 | Maize | plasma membrane | 60.42 | 46.22 |
| KRH53148 | Soybean | plasma membrane | 38.54 | 39.68 |
| KRH64762 | Soybean | plasma membrane | 37.5 | 39.13 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | EMBL:ACUP02011102 | EnsemblPlantsGene:GLYMA_18G153100 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004252 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | UniProt:I1N1Q9 | InterPro:IPR035952 |
| EnsemblPlants:KRG99546 | ProteinID:KRG99546 | ProteinID:KRG99546.1 | PFAM:PF01694 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF38 |
| InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | SUPFAM:SSF144091 | TMHMM:TMhelix | UniParc:UPI000233EB30 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:29405802..29412277
Molecular Weight (calculated)
42448.3 Da
IEP (calculated)
8.905
GRAVY (calculated)
0.436
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEPPRPLE IHLRVNSKRG GTTMVHPVAT AVPVQYPREE EGVKHYRKWF AWLIPLFVVA NVAMFAITMY VNNCPRNSVS CIASFLGRFS FQPFKENPLL
101: GPSSLTLQKM GALDVSRVVH KHQGWRLVTC MWLHAGVFHL LANMLGILVI GIRLEQEFGF VLIGLLFFIS GFGGSLLSAL FIQSNISVGA SGALFGLLGG
201: MLSELITNWS IYDNKLAALL TLVIIIVINL AVGILPHVDN FAHIGGFLTG FLLGFVFLIR PQFGWVNQRY APLNYSPGRS KPKFKKYQCI LWVLSLIILV
301: VGLSVGLVAL LRGVDANDHC SWCHYLSCVP TSKWSCHTEA AYCESNQLGN QLNVTCSSTG KFSTYFMENP TSSQIQQLCS QLCS
101: GPSSLTLQKM GALDVSRVVH KHQGWRLVTC MWLHAGVFHL LANMLGILVI GIRLEQEFGF VLIGLLFFIS GFGGSLLSAL FIQSNISVGA SGALFGLLGG
201: MLSELITNWS IYDNKLAALL TLVIIIVINL AVGILPHVDN FAHIGGFLTG FLLGFVFLIR PQFGWVNQRY APLNYSPGRS KPKFKKYQCI LWVLSLIILV
301: VGLSVGLVAL LRGVDANDHC SWCHYLSCVP TSKWSCHTEA AYCESNQLGN QLNVTCSSTG KFSTYFMENP TSSQIQQLCS QLCS
001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
Arabidopsis Description
RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.