CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64762	Soybean	plasma membrane	94.37	95.65
VIT_18s0001g04400.t01	Wine grape	plasma membrane	53.08	57.89
Solyc11g013320.1.1	Tomato	plasma membrane	55.5	53.77
Bra015649.1-P	Field mustard	plasma membrane	51.74	50.0
CDX87497	Canola	plasma membrane	51.74	50.0
AT1G77860.2	Thale cress	nucleus, peroxisome, plasma membrane	50.94	49.35
CDX88394	Canola	plasma membrane	50.94	48.97
PGSC0003DMT400016755	Potato	cytosol	49.6	48.18
KRH38564	Soybean	plasma membrane	38.07	43.03
KRH09112	Soybean	plasma membrane	37.8	42.86
KRG91456	Soybean	cytosol, golgi, plasma membrane	37.27	42.25
KRH35359	Soybean	cytosol, golgi, plasma membrane	36.46	41.21
KRH10251	Soybean	plasma membrane	42.63	40.87
KRH23080	Soybean	plasma membrane	42.36	40.31
KRG99546	Soybean	plasma membrane	39.68	38.54
KRH66050	Soybean	plasma membrane	39.68	38.44
KRG99955	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	39.68	37.37
KRH09741	Soybean	plasma membrane	31.64	37.34
KRH49106	Soybean	plasma membrane	25.74	35.82

Protein Annotations

Gene3D:1.20.1540.10	EntrezGene:100775875	MapMan:19.4.2.6	EMBL:ACUP02003451	EnsemblPlantsGene:GLYMA_06G107600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR035952
UniProt:K7KUE9	EnsemblPlants:KRH53148	ProteinID:KRH53148	ProteinID:KRH53148.1	PFAM:PF01694	PANTHER:PTHR22936
PANTHER:PTHR22936:SF39	InterPro:Peptidase_S54_rhomboid	InterPro:Peptidase_S54_rhomboid_dom	InterPro:Rhomboid-like_sf	SUPFAM:SSF144091	TMHMM:TMhelix
UniParc:UPI000233A8FF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:8644542..8647806

Molecular Weight (calculated)

41307.9 Da

IEP (calculated)

8.547

GRAVY (calculated)

0.455

Length

373 amino acids

Sequence
(BLAST)

001: MAESSECIEV KVSPAHDQRI PLMRSRRGGR RRRGDTWVVS VFVIIQIGVF IATMLVNDCW NNSHGDCVLQ ALGRFSFQPL PENPLLGPSQ SKLDEMGALR
101: RSLLTEHHQT WRLFTFPFLH AGVFHLLLNL SSVIYVGVSL EHHFGPIRIG IIYALSAFVG SLVASLFLQN MPAVGASGAL YGLLGTLLSE LVWNWKFHSN
201: KISAIASLVF VFVCNFVLGF LPYVDNFASI GGFISGFLLG SVFLLSPQLQ PVAPNKGGLI DYGVKSCIKL KLKQKLDRPV LRIVSLILFS LLLAGCLVAV
301: LHGININSYC TWCPYVDCIP FTSWHCKDTE TSCETMVSNA QLTMTCIGNG NFRVFPFTNI SRARFNDLCN LIC

Best Arabidopsis Sequence Match ( AT1G77860.2 )
(BLAST)

001: MEVPTESKTT QIDEISHNLS FTTSNAGDSS WDKISFFRHR SRQIKRDTWL VSVFVLLQIV LFAVTMGVND CSGNSHGHCS AKLLGRFSFQ SLSENPMLGP
101: SASTLEHMGG LSWKALTENH EIWRILTSPW LHSGLFHLFI NLGSLIFVGI YMEQQFGPLR IAVIYFLSGI MGSLFAVLFV RNIPSISSGA AFFGLIGAML
201: SALAKNWNLY NSKISALAII FTIFTVNFLI GFLPFIDNFA NIGGFISGFL LGFVLLFKPQ LRQMPPSHKG KLFEDDMNRS TRLKEQFDRP VLRIICLLVF
301: CGILAGVLLA ACWGVNLNRH CHWCRYVDCV PTKKWSCSDM TTSCEAMVSD AQLTLTCMAN GKFRIFPFTN ISQARTEDLC TLVCS

Arabidopsis Description

KOMRhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178W8L8]
SUBAcon: [peroxisome,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.