CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
vacuole 2
endoplasmic reticulum 2
golgi 2
plasma membrane 4
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	endoplasmic reticulum, golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g06570.t01	Wine grape	plasma membrane	58.54	64.01
CDY60552	Canola	plasma membrane	60.76	61.54
Bra030374.1-P	Field mustard	plasma membrane	60.44	61.22
CDX87921	Canola	plasma membrane	40.51	60.95
Bra018974.1-P	Field mustard	plasma membrane	60.13	60.32
CDY65908	Canola	plasma membrane	60.13	60.32
CDY40148	Canola	plasma membrane	60.13	60.32
AT1G52580.1	Thale cress	cytosol, golgi, plasma membrane	58.86	60.19
KRH09112	Soybean	plasma membrane	49.68	47.72
KRG91456	Soybean	cytosol, golgi, plasma membrane	49.37	47.42
KRH38564	Soybean	plasma membrane	49.37	47.27
KRH35359	Soybean	cytosol, golgi, plasma membrane	48.73	46.67
KRG99546	Soybean	plasma membrane	50.63	41.67
KRH66050	Soybean	plasma membrane	50.63	41.56
KRH10251	Soybean	plasma membrane	50.63	41.13
KRH23080	Soybean	plasma membrane	50.95	41.07
GSMUA_Achr2P08240_001	Banana	plasma membrane	45.57	39.34
KRH49106	Soybean	plasma membrane	33.23	39.18
KRG99955	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	47.78	38.13
KRH64762	Soybean	plasma membrane	37.03	31.79
KRH53148	Soybean	plasma membrane	37.34	31.64

Protein Annotations

Gene3D:1.20.1540.10	EntrezGene:100816530	MapMan:19.4.2.6	EMBL:ACUP02009109	EnsemblPlantsGene:GLYMA_15G009000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR035952
UniProt:K7M8T4	EnsemblPlants:KRH09741	ProteinID:KRH09741	ProteinID:KRH09741.1	PFAM:PF01694	PANTHER:PTHR22936
PANTHER:PTHR22936:SF64	InterPro:Peptidase_S54_rhomboid	InterPro:Peptidase_S54_rhomboid_dom	InterPro:Rhomboid-like_sf	MEROPS:S54.015	SUPFAM:SSF144091
TMHMM:TMhelix	UniParc:UPI0002962FAE	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:709149..711293

Molecular Weight (calculated)

35613.0 Da

IEP (calculated)

8.527

GRAVY (calculated)

0.412

Length

316 amino acids

Sequence
(BLAST)

001: MGKKPPHLSD VEAARNPPSP PPTFHVPLPS MWFPWLVPLI FLATIAMFVY TMYENDCPAY LDEEVCLFSQ YLGRFSFQPF RENPLLGPAI RTLRLLGALE
101: KELVVDQNEV WRFFSCMFLH AGVVHLLANM FSLLFIGVRL EKEFGFLKIG LLYVLSGFGG SVLSVLHLKE SEANTVSVGA SGALFGLLGA MLSELLTNWS
201: IYANKCAALT SLLIIVGLNL AVGFLPHVDN SAHVGGFLAG YFLGFVLLMR PQYGYVNRKY IPPGYDVKRK SKYKWYQYFF LIMSVIILLL GYAYGLAKLY
301: IEKSPENFPF LESYPR

Best Arabidopsis Sequence Match ( AT1G52580.1 )
(BLAST)

001: MGKRPPIPPD IENGPPPPAR PHFRPPIPVP WVAWLVPLIL AANFVTFATT MYVNDCPARS DECLLFDVLG RLSFQPIKEN MLLGPSIPTL RKLGALERRL
101: VEEGERWRLI SCIWLHGGFL HLMANMISLM CIGMRLEQEF GFMRIGALYV ISGLGGSLVS CLTDSQGERV SVGASGALFG LLGAMLSELI TNWTIYENKC
201: TALMTLILII VLNLSVGFLP RVDNSAHFGG FLAGFFLGFV LLLRPQYGYV NPKYIPPGYD MKHKKSKHKC YQHIFRFTSL AILLAGFIAG YTKLLREHTI
301: QSMPFRDFN

Arabidopsis Description

RBL5RHOMBOID-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSR0]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.