Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99546 | Soybean | plasma membrane | 94.29 | 94.53 |
| VIT_08s0007g00470.t01 | Wine grape | plasma membrane | 75.58 | 75.0 |
| Solyc09g010880.2.1 | Tomato | extracellular | 66.23 | 66.58 |
| PGSC0003DMT400022764 | Potato | plasma membrane | 66.49 | 66.32 |
| KRG99955 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 67.27 | 65.4 |
| Os01t0147300-01 | Rice | plasma membrane | 34.55 | 65.2 |
| TraesCS4A01G176100.1 | Wheat | plasma membrane | 52.73 | 64.04 |
| KRH49106 | Soybean | plasma membrane | 42.86 | 61.57 |
| KRH10251 | Soybean | plasma membrane | 61.04 | 60.41 |
| KRG91456 | Soybean | cytosol, golgi, plasma membrane | 51.43 | 60.18 |
| KRH09112 | Soybean | plasma membrane | 51.43 | 60.18 |
| KRH23080 | Soybean | plasma membrane | 61.04 | 59.95 |
| KRH35359 | Soybean | cytosol, golgi, plasma membrane | 51.17 | 59.7 |
| TraesCS3D01G070700.1 | Wheat | mitochondrion, plasma membrane | 47.27 | 59.67 |
| Os11t0704800-01 | Rice | plasma membrane | 57.4 | 59.09 |
| TraesCS3B01G085300.1 | Wheat | plasma membrane | 56.88 | 58.56 |
| KRH38564 | Soybean | plasma membrane | 50.13 | 58.48 |
| TraesCS3A01G071500.1 | Wheat | plasma membrane | 56.1 | 57.75 |
| TraesCS4D01G136600.2 | Wheat | plasma membrane | 56.62 | 57.37 |
| AT3G53780.2 | Thale cress | plasma membrane | 58.7 | 57.36 |
| HORVU4Hr1G027850.1 | Barley | peroxisome | 56.1 | 56.99 |
| TraesCS4B01G141600.1 | Wheat | plasma membrane | 56.88 | 56.88 |
| CDY65838 | Canola | plasma membrane | 56.88 | 56.01 |
| CDX78204 | Canola | plasma membrane | 56.88 | 56.01 |
| CDY30844 | Canola | cytosol, peroxisome, plasma membrane | 56.62 | 55.75 |
| CDX76189 | Canola | cytosol, peroxisome, plasma membrane | 56.62 | 55.75 |
| EES00318 | Sorghum | golgi, peroxisome, plasma membrane | 60.26 | 55.11 |
| CDX73525 | Canola | plasma membrane | 56.36 | 53.98 |
| Zm00001d048606_P001 | Maize | cytosol, nucleus, plasma membrane | 53.77 | 51.62 |
| Bra014862.1-P | Field mustard | cytosol | 56.36 | 51.18 |
| KRH09741 | Soybean | plasma membrane | 41.56 | 50.63 |
| OQU84103 | Sorghum | golgi, peroxisome, plasma membrane, plastid | 55.84 | 49.88 |
| Zm00001d039870_P002 | Maize | plasma membrane | 61.56 | 47.21 |
| KRH53148 | Soybean | plasma membrane | 38.44 | 39.68 |
| KRH64762 | Soybean | plasma membrane | 37.4 | 39.13 |
Protein Annotations
| Gene3D:1.20.1540.10 | EntrezGene:100801675 | MapMan:19.4.2.6 | EMBL:ACUP02001864 | EnsemblPlantsGene:GLYMA_03G079800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | UniProt:I1JLP8 |
| InterPro:IPR035952 | EnsemblPlants:KRH66050 | ProteinID:KRH66050 | ProteinID:KRH66050.1 | PFAM:PF01694 | PANTHER:PTHR22936 |
| PANTHER:PTHR22936:SF38 | InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | SUPFAM:SSF144091 | TMHMM:TMhelix |
| UniParc:UPI0002336B41 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:20391305..20396375
Molecular Weight (calculated)
42772.8 Da
IEP (calculated)
8.782
GRAVY (calculated)
0.439
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEPRPLEI HLRVNSKRGT TMVHPVAAAE TVEVPIQYPR EEEVKHYRKW FSWLIPLFVV ANIVMFVITM YVNNCPRNSV SCIASFLGRF SFQPFKENPL
101: LGPSSLTLQK MGALDVSRVV HRHQGWRLIT CMWLHAGVFH LLANMLGILV IGIRLEQEFG FVLIGLLFVI SGFGGSLLSA LFIQSNISVG ASGALFGLLG
201: GMLSELITNW SIYDNKLTAL LTLVIIIVIN LAVGILPHVD NFAHIGGFLT GFLLGFVFLI RPQFGWVNQR YAPLNYSPGR VKPKFKKYQC ILWVFSLIIL
301: VVGLSVGLVA LLQGVDANDH CSWCHYLSCV PTSKWSCHTE AAYCQSNQLG NQLNVTCSSN GKSSTYFMQN PTSSQIQQLC TQLCS
101: LGPSSLTLQK MGALDVSRVV HRHQGWRLIT CMWLHAGVFH LLANMLGILV IGIRLEQEFG FVLIGLLFVI SGFGGSLLSA LFIQSNISVG ASGALFGLLG
201: GMLSELITNW SIYDNKLTAL LTLVIIIVIN LAVGILPHVD NFAHIGGFLT GFLLGFVFLI RPQFGWVNQR YAPLNYSPGR VKPKFKKYQC ILWVFSLIIL
301: VVGLSVGLVA LLQGVDANDH CSWCHYLSCV PTSKWSCHTE AAYCQSNQLG NQLNVTCSSN GKSSTYFMQN PTSSQIQQLC TQLCS
001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR
Arabidopsis Description
RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.