Factsheet for Os11t0704800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 1
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G176100.1	Wheat	plasma membrane	74.87	88.33
HORVU4Hr1G027850.1	Barley	peroxisome	84.76	83.64
TraesCS4D01G136600.2	Wheat	plasma membrane	84.22	82.89
TraesCS4B01G141600.1	Wheat	plasma membrane	84.49	82.08
OQU84103	Sorghum	golgi, peroxisome, plasma membrane, plastid	76.2	66.13
Zm00001d048606_P001	Maize	cytosol, nucleus, plasma membrane	70.86	66.08
GSMUA_Achr6P34110_001	Banana	plasma membrane	63.1	60.51
Os09t0525900-01	Rice	plasma membrane	50.8	58.82
Os08t0546700-01	Rice	plasma membrane	50.8	58.82
GSMUA_Achr10P...	Banana	plasma membrane	38.24	58.61
Os03t0116400-01	Rice	cytosol, peroxisome, plasma membrane	50.8	58.46
KRG99546	Soybean	plasma membrane	59.36	57.81
KRH66050	Soybean	plasma membrane	59.09	57.4
Os01t0147300-01	Rice	plasma membrane	31.28	57.35
CDY47879	Canola	plasma membrane	58.29	57.22
VIT_08s0007g00470.t01	Wine grape	plasma membrane	58.82	56.7
VIT_06s0004g04890.t01	Wine grape	plasma membrane	59.09	56.52
CDY39528	Canola	plasma membrane	57.75	56.4
Os10t0521900-01	Rice	plasma membrane	49.73	56.02
KRH23080	Soybean	plasma membrane	58.29	55.61
KRH10251	Soybean	plasma membrane	57.49	55.27
AT2G29050.1	Thale cress	golgi, peroxisome, plasma membrane, plastid	56.42	54.24
Bra028389.1-P	Field mustard	plasma membrane	57.75	54.14
KRG99955	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	55.62	52.53
KRH49106	Soybean	plasma membrane	36.9	51.49
CDY65838	Canola	plasma membrane	52.41	50.13
CDX78204	Canola	plasma membrane	52.41	50.13
CDY30844	Canola	cytosol, peroxisome, plasma membrane	51.87	49.62
CDX76189	Canola	cytosol, peroxisome, plasma membrane	51.6	49.36
AT3G53780.2	Thale cress	plasma membrane	51.6	48.98
Os04t0569300-01	Rice	cytosol	44.65	48.83
CDX73525	Canola	plasma membrane	51.87	48.26
GSMUA_Achr10P...	Banana	cytosol	12.3	46.0
Bra014862.1-P	Field mustard	cytosol	50.53	44.58

Protein Annotations

Gene3D:1.20.1540.10	MapMan:19.4.2.6	EntrezGene:4351216	ProteinID:AAX95289.1	ProteinID:ABA95509.1	ProteinID:BAF28910.1
ProteinID:BAT15405.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004252
GO:GO:0005488	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR035952	EnsemblPlantsGene:Os11g0704800
EnsemblPlants:Os11t0704800-01	PFAM:PF01694	PANTHER:PTHR22936	PANTHER:PTHR22936:SF61	InterPro:Peptidase_S54_rhomboid	InterPro:Peptidase_S54_rhomboid_dom
UniProt:Q53MA5	InterPro:Rhomboid-like_sf	SUPFAM:SSF144091	TMHMM:TMhelix	UniParc:UPI000050945C	RefSeq:XP_015615259.1
SEG:seg	:	:	:	:	:

Description

Rhomboid 18, RHOMBOID 18Similar to Membrane protein. (Os11t0704800-01)

Coordinates

chr11:-:28853530..28857356

Molecular Weight (calculated)

41399.4 Da

IEP (calculated)

9.999

GRAVY (calculated)

0.404

Length

374 amino acids

Sequence
(BLAST)

001: MKPSPAANLD VRVERPRPPP VHPHRPGSLR ARPYYRRWTP WIVAAIALSC VVVFLVSMYV NDCPRRNSGD CAAGFLGRFA FQPLKENPLL GPSSATLLKM
101: GALDVTKVVH GHQGWRLITC IWLHAGVVHL LINMLCLLFI GIRLEQEFGF VRIGLVYLIS GLGGSLMSAL FIRSSISVGA SGALFGLIGS MLSELITNWS
201: LYANKVAALL TLVFVIVVNL ALGILPRVDN FAHIGGLISG FLLGFVMFIR PQFAWINQRR VAPGQQPAPV KRKHKTYQYI LWLAAAIMLI VGFTVAIVLL
301: LRGYNANDHC SWCHYLSCVP TKRWKCNSSP TYCTVMQQAN TLNLTCEGTN VHRSYLIADA TQDKINQLCN QLCS

Best Arabidopsis Sequence Match ( AT2G29050.1 )
(BLAST)

001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR

Arabidopsis Description

RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.