CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23080	Soybean	plasma membrane	93.57	92.86
VIT_06s0004g04890.t01	Wine grape	plasma membrane	71.98	71.61
CDY47879	Canola	plasma membrane	65.55	66.93
CDY39528	Canola	plasma membrane	65.3	66.32
AT2G29050.1	Thale cress	golgi, peroxisome, plasma membrane, plastid	66.07	66.07
GSMUA_Achr5P20070_001	Banana	plasma membrane	33.93	64.39
Bra028389.1-P	Field mustard	plasma membrane	65.3	63.66
GSMUA_Achr5P20060_001	Banana	cytosol	9.0	63.64
KRG91456	Soybean	cytosol, golgi, plasma membrane	52.44	62.01
KRH09112	Soybean	plasma membrane	51.67	61.09
KRH66050	Soybean	plasma membrane	60.41	61.04
KRH38564	Soybean	plasma membrane	51.67	60.91
KRH35359	Soybean	cytosol, golgi, plasma membrane	51.67	60.91
TraesCS4A01G176100.1	Wheat	plasma membrane	49.36	60.57
KRG99546	Soybean	plasma membrane	59.64	60.42
TraesCS3D01G070700.1	Wheat	mitochondrion, plasma membrane	46.53	59.34
Os01t0147300-01	Rice	plasma membrane	31.11	59.31
Os11t0704800-01	Rice	plasma membrane	55.27	57.49
TraesCS3B01G085300.1	Wheat	plasma membrane	55.27	57.49
TraesCS3A01G071500.1	Wheat	plasma membrane	55.01	57.22
HORVU4Hr1G027850.1	Barley	peroxisome	55.27	56.73
TraesCS4D01G136600.2	Wheat	plasma membrane	55.27	56.58
TraesCS4B01G141600.1	Wheat	plasma membrane	55.27	55.84
KRG99955	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	55.53	54.55
KRH49106	Soybean	plasma membrane	37.02	53.73
EES00318	Sorghum	golgi, peroxisome, plasma membrane	56.56	52.26
KRH09741	Soybean	plasma membrane	41.13	50.63
Zm00001d048606_P001	Maize	cytosol, nucleus, plasma membrane	51.16	49.63
OQU84103	Sorghum	golgi, peroxisome, plasma membrane, plastid	52.96	47.8
Zm00001d039870_P002	Maize	plasma membrane	57.58	44.62
KRH53148	Soybean	plasma membrane	40.87	42.63
KRH64762	Soybean	plasma membrane	39.33	41.58

Protein Annotations

Gene3D:1.20.1540.10	EntrezGene:100781964	MapMan:19.4.2.6	EMBL:ACUP02009127	EnsemblPlantsGene:GLYMA_15G037600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	UniProt:I1MDE7
InterPro:IPR035952	EnsemblPlants:KRH10251	ProteinID:KRH10251	ProteinID:KRH10251.1	PFAM:PF01694	PANTHER:PTHR22936
PANTHER:PTHR22936:SF46	InterPro:Peptidase_S54_rhomboid	InterPro:Peptidase_S54_rhomboid_dom	InterPro:Rhomboid-like_sf	SUPFAM:SSF144091	TMHMM:TMhelix
UniParc:UPI000233B196	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:2964304..2967785

Molecular Weight (calculated)

43097.8 Da

IEP (calculated)

9.474

GRAVY (calculated)

0.382

Length

389 amino acids

Sequence
(BLAST)

001: MGRDPSSATV EVQVHPRRDT IAGCGRRLSP SPPSPPAVRD RDFSLFKRWF PWLVPTFVVA NIVVFIVTMY INDCPKHSFY GSCVASFLGR FSFQPLKENP
101: LFGPSSSTLE KMGALEVGKV IHRHQVWRLF SCIWLHGGVV HLLANMLSLV FIGIRLEQEF GFVRIGFLYV ISGFGGSLLS ALFIQEGISV GASGALFGLL
201: GGMLSELLIN WTIYANKFAA LLTLIVIVVI NLAVGILPHV DNFAHIGGFV SGFLLGFIFL IRPQFKWVSS RHRNSHSSAA APSVKYKHKP YQYALWVISF
301: ILLIAGLVTG LVLLLRSANL NDRCSWCHYL SCIPTSKWSC KSQQLYCEST QIGNQLNITC LSNGRSDMFP LSNTSTSEAQ QQLCSRLCS

Best Arabidopsis Sequence Match ( AT2G29050.1 )
(BLAST)

001: MARDRREGLE IKVVNPPAAA TNNVAVETSP ATATRRRRQQ QRASFAEFRP FKLWFPWLVP AIVVANIALF AISMFINNCP KNSAYCLARF LGRFAFQPMK
101: ENPLLGPSSL TLEKMGALDV SMVVHKHEVW RLFTCIWLHA GVFHVLANML SLIFIGIRLE QEFGFVRIGL LYMISGFGGS LLSSLFNRAG ISVGASGALF
201: GLLGAMLSEL LTNWTIYANK FAALLTLIFI IAINLAVGIL PHVDNFAHLG GFTSGFLLGF VFLIRPQYGY FNQRNNPRGY AAPSAKSKHK PYQYVLWITS
301: LVLLIAGYTA GLVVLLRGTD LNKHCSWCHY LSCIPTSLWS CKSQNVYCES SQIGQQMNLT CITNGKTEMY KLSNDIPSRI QQLCSQLCR

Arabidopsis Description

RBL1RHOMBOID-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX7]
SUBAcon: [peroxisome,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.