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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 2
  • peroxisome 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G345400.1
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63120.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT1G63120.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT1G63120.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
AT5G07250.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G270400.1 Wheat plasma membrane 98.48 98.48
TraesCS7A01G269900.1 Wheat plasma membrane 96.65 98.14
HORVU7Hr1G056630.1 Barley plasma membrane 96.95 97.55
Os08t0546700-01 Rice plasma membrane 84.15 85.45
Zm00001d052734_P002 Maize plasma membrane 79.57 81.06
TraesCS5B01G314900.1 Wheat plasma membrane 78.96 80.19
GSMUA_Achr2P03320_001 Banana cytosol, golgi, plasma membrane 66.16 67.6
GSMUA_Achr1P07920_001 Banana plasma membrane 65.85 67.29
GSMUA_Achr9P20880_001 Banana plasma membrane 64.02 65.22
KRH09112 Soybean plasma membrane 62.8 62.61
VIT_02s0025g04130.t01 Wine grape cytosol, plasma membrane, vacuole 62.2 62.2
KRH38564 Soybean plasma membrane 62.5 62.12
KRG91456 Soybean cytosol, golgi, plasma membrane 61.89 61.7
PGSC0003DMT400037141 Potato cytosol, golgi, plasma membrane 59.76 61.64
Solyc03g026080.2.1 Tomato plasma membrane 59.45 61.32
KRH35359 Soybean cytosol, golgi, plasma membrane 61.59 61.21
VIT_16s0100g00640.t01 Wine grape plasma membrane 60.37 60.92
AT1G63120.1 Thale cress cytosol, golgi, plasma membrane 58.54 60.57
CDY47350 Canola plasma membrane 57.93 60.32
CDX98992 Canola plasma membrane 62.2 60.0
Bra027622.1-P Field mustard plasma membrane 57.32 59.87
TraesCS4B01G356600.1 Wheat plasma membrane 60.67 59.58
Bra026997.1-P Field mustard cytosol, golgi, plasma membrane 57.93 59.56
CDY45976 Canola plasma membrane 57.93 59.56
CDY67235 Canola plasma membrane 57.93 59.56
PGSC0003DMT400007890 Potato plasma membrane 59.76 59.39
AT5G07250.1 Thale cress plasma membrane 62.5 59.25
TraesCS1B01G196600.1 Wheat plasma membrane 58.54 58.9
CDY49197 Canola plasma membrane 57.62 58.88
Solyc08g080500.2.1 Tomato cytosol, golgi, plasma membrane 59.76 58.86
Bra009279.1-P Field mustard cytosol, peroxisome, plasma membrane 62.2 58.79
CDX70021 Canola plasma membrane 62.2 58.79
CDY66606 Canola plasma membrane 53.66 57.89
Bra019783.1-P Field mustard plasma membrane 53.66 57.89
CDX70020 Canola mitochondrion, plasma membrane 56.71 57.41
AT1G12750.4 Thale cress plasma membrane 53.66 57.33
CDX78286 Canola plasma membrane 56.71 57.23
Bra005930.1-P Field mustard plasma membrane 56.4 56.92
CDX81043 Canola plasma membrane 55.79 56.13
TraesCS2B01G419100.1 Wheat plasma membrane 57.62 55.92
CDY53134 Canola plasma membrane 50.91 53.18
Bra013673.1-P Field mustard plasma membrane 45.43 52.84
CDY41251 Canola plasma membrane 50.0 52.4
CDX98993 Canola cytosol 50.3 51.89
AT4G23070.1 Thale cress plasma membrane 49.09 51.44
CDY60266 Canola plasma membrane 54.57 50.0
Bra009280.1-P Field mustard cytosol 54.57 47.99
TraesCS4B01G141600.1 Wheat plasma membrane 55.79 47.53
TraesCS3B01G085300.1 Wheat plasma membrane 51.83 45.45
Protein Annotations
Gene3D:1.20.1540.10MapMan:19.4.2.6GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0005575
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0019538InterPro:IPR035952PFAM:PF01694PANTHER:PTHR22936PANTHER:PTHR22936:SF62InterPro:Peptidase_S54_rhomboid
InterPro:Peptidase_S54_rhomboid_domInterPro:Rhomboid-like_sfSUPFAM:SSF144091TMHMM:TMhelixEnsemblPlantsGene:TraesCS7B01G168100EnsemblPlants:TraesCS7B01G168100.1
SEG:seg:::::
Description
No Description!
Coordinates
chr7B:-:234905895..234910949
Molecular Weight (calculated)
36168.2 Da
IEP (calculated)
8.699
GRAVY (calculated)
0.339
Length
328 amino acids
Sequence
(BLAST)
001: MASGSGSGEG KAGRAGAGYQ QYASYGTGTG YDERQWWPWL VPTVLGACVS VFAVEMYLND CPRHGMYLGG DASCVAGFLR QFSFQPLREN PLLGPSSATL
101: EKMGALDWAK VVHQHQWWRL FSCIWLHAGL IHLIVNMMSL LFIGIRLEQQ FGFVRIGIIY LLSGFGGSVL SALFLRNHYI SVGASGALFG LLGSMLSELI
201: MNWTIYSNKA AAITTLLFII AINLAIGILP HADNFAHIGG FVSGFLFGFV LLARPQFGWM ERHELPQTDQ PPKYKTYQYA LWGAALLLLL VGYVVGLAML
301: FKGKNGNDGC HWCRYLNCVP SSRWKCST
Best Arabidopsis Sequence Match ( AT1G12750.1 )
(BLAST)
001: MRSRDMERGR KHRGDTQWTA WLTPTIVVAN VSIFIVVMYT NDCPKTTTGA NGDCVAKLLR RFSFQPLREN PFLGPSSSTL EKLGALDWKK VVQGNEKWRL
101: ITAMWLHAGI IHLVMNMFDV IIFGIRLEQQ FGFIRIGLIY LISGFGGSIL SALFLQKSIS VGASGALLGL MGAMLSELLT NWTIYKSKLC ALLSFLFIIA
201: INLAIGLLPW VDNFAHIGGL LTGFCLGFIL LMQPQSGWEE FRNSSQYGAR ARSKYNPCQY VLFFVAAVLV VAGLTVGLVM LFDGENGNKH CKWCHRLDCY
301: PTSKWSC
Arabidopsis Description
RBL6RHOMBOID-like protein 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ48]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.