Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53134 | Canola | plasma membrane | 88.18 | 87.9 |
| Bra013673.1-P | Field mustard | plasma membrane | 77.96 | 86.52 |
| CDY41251 | Canola | plasma membrane | 85.3 | 85.3 |
| AT1G63120.1 | Thale cress | cytosol, golgi, plasma membrane | 56.23 | 55.52 |
| VIT_02s0025g04130.t01 | Wine grape | cytosol, plasma membrane, vacuole | 57.51 | 54.88 |
| AT1G12750.4 | Thale cress | plasma membrane | 53.04 | 54.07 |
| TraesCS4A01G179600.1 | Wheat | plasma membrane | 32.59 | 53.12 |
| Zm00001d021231_P002 | Maize | plasma membrane | 53.67 | 51.85 |
| EER99221 | Sorghum | cytosol, peroxisome, plasma membrane | 53.67 | 51.69 |
| PGSC0003DMT400007890 | Potato | plasma membrane | 54.31 | 51.52 |
| TraesCS5D01G320400.1 | Wheat | plasma membrane | 52.4 | 51.25 |
| HORVU5Hr1G080690.2 | Barley | plasma membrane | 52.4 | 51.09 |
| Zm00001d006179_P002 | Maize | plasma membrane | 53.35 | 51.07 |
| Solyc08g080500.2.1 | Tomato | cytosol, golgi, plasma membrane | 54.31 | 51.05 |
| TraesCS5A01G314000.1 | Wheat | plasma membrane | 52.4 | 50.93 |
| TraesCS5B01G314900.1 | Wheat | plasma membrane | 52.4 | 50.77 |
| Os10t0521900-01 | Rice | plasma membrane | 53.67 | 50.6 |
| Os09t0525900-01 | Rice | plasma membrane | 52.08 | 50.46 |
| Os03t0116400-01 | Rice | cytosol, peroxisome, plasma membrane | 52.4 | 50.46 |
| Zm00001d029667_P001 | Maize | plasma membrane | 53.67 | 50.3 |
| Zm00001d029668_P001 | Maize | plasma membrane | 53.67 | 50.3 |
| TraesCS7A01G269900.1 | Wheat | plasma membrane | 51.76 | 50.15 |
| Os08t0546700-01 | Rice | plasma membrane | 51.76 | 50.15 |
| EES11282 | Sorghum | cytosol | 53.99 | 49.71 |
| TraesCS7D01G270400.1 | Wheat | plasma membrane | 52.08 | 49.7 |
| TraesCS1D01G187500.1 | Wheat | plasma membrane | 51.12 | 49.54 |
| Zm00001d052734_P002 | Maize | plasma membrane | 50.8 | 49.38 |
| TraesCS1A01G188900.1 | Wheat | plasma membrane | 51.44 | 49.24 |
| HORVU1Hr1G048610.3 | Barley | plasma membrane | 51.12 | 49.23 |
| TraesCS2B01G419100.1 | Wheat | plasma membrane | 53.04 | 49.11 |
| TraesCS7B01G168100.1 | Wheat | plasma membrane | 51.44 | 49.09 |
| EER95642 | Sorghum | cytosol, golgi, plasma membrane | 51.12 | 49.08 |
| TraesCS2D01G398500.1 | Wheat | plasma membrane | 53.04 | 48.97 |
| TraesCS4B01G356600.1 | Wheat | plasma membrane | 52.08 | 48.8 |
| TraesCS5A01G526000.1 | Wheat | plasma membrane | 51.76 | 48.8 |
| TraesCS1B01G196600.1 | Wheat | plasma membrane | 50.8 | 48.77 |
| HORVU7Hr1G056630.1 | Barley | plasma membrane | 50.8 | 48.77 |
| EER94630 | Sorghum | cytosol, golgi, plasma membrane | 52.08 | 48.66 |
| TraesCS4D01G350300.1 | Wheat | plasma membrane | 51.76 | 48.65 |
| AT5G07250.1 | Thale cress | plasma membrane | 53.67 | 48.55 |
| Zm00001d002632_P001 | Maize | plasma membrane | 52.72 | 48.53 |
| TraesCS2A01G401000.1 | Wheat | plasma membrane | 52.72 | 48.39 |
| Zm00001d027355_P001 | Maize | plasma membrane | 49.52 | 48.14 |
| Os04t0569300-01 | Rice | cytosol | 52.4 | 47.95 |
| AT1G52580.1 | Thale cress | cytosol, golgi, plasma membrane | 41.85 | 42.39 |
| AT2G29050.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 52.08 | 41.9 |
| HORVU4Hr1G086150.3 | Barley | plastid | 51.44 | 41.49 |
| AT3G53780.2 | Thale cress | plasma membrane | 51.44 | 40.86 |
| HORVU2Hr1G095170.6 | Barley | mitochondrion | 43.13 | 36.59 |
| HORVU0Hr1G006330.1 | Barley | plastid | 15.34 | 31.58 |
| HORVU3Hr1G029090.1 | Barley | plastid | 15.34 | 31.58 |
| AT1G77860.2 | Thale cress | nucleus, peroxisome, plasma membrane | 36.74 | 29.87 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | EntrezGene:828406 | UniProt:A0A178UXE9 | ProteinID:AEE84702.1 | ArrayExpress:AT4G23070 |
| EnsemblPlantsGene:AT4G23070 | RefSeq:AT4G23070 | TAIR:AT4G23070 | RefSeq:AT4G23070-TAIR-G | EnsemblPlants:AT4G23070.1 | TAIR:AT4G23070.1 |
| Symbol:ATRBL7 | ProteinID:CAA19823.1 | ProteinID:CAB79262.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 |
| GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR035952 | RefSeq:NP_194038.1 | UniProt:O82756 |
| ProteinID:OAO98578.1 | PFAM:PF01694 | PO:PO:0009005 | PO:PO:0025195 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF65 |
| InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | InterPro:Rhomboid-like_sf | MEROPS:S54.A03 | SUPFAM:SSF144091 | TMHMM:TMhelix |
| UniParc:UPI00000AB4C7 | SEG:seg | : | : | : | : |
Description
RBL7Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UXE9]
Coordinates
chr4:-:12090690..12092217
Molecular Weight (calculated)
34533.5 Da
IEP (calculated)
7.875
GRAVY (calculated)
0.489
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTAAEEDP EGGSRETNNG GETTPDMQWR SWIIPIVVIA NVVVFVVVMY YNDCPHKSHR CLAKFLGRFS FESFKSNPLL GPSSSTLEKM GALAWGKIVH
101: KRQVWRLLTC MWLHAGVIHL LANMCCVAYI GVRLEQQFGF VRVGTIYLVS GFCGSILSCL FLEDAISVGA SSALFGLLGA MLSELLINWT TYDNKGVAIV
201: MLLVIVGVNL GLGTLPPVDN FAHIGGFFGG FLLGFLLLIH PQFEWEENQV SLMPGTIVKP KYNTCQLVLC IVASIVFVAG FTSGLVILFR GDSLNRYCKW
301: CHKLSYSSKS QWT
101: KRQVWRLLTC MWLHAGVIHL LANMCCVAYI GVRLEQQFGF VRVGTIYLVS GFCGSILSCL FLEDAISVGA SSALFGLLGA MLSELLINWT TYDNKGVAIV
201: MLLVIVGVNL GLGTLPPVDN FAHIGGFFGG FLLGFLLLIH PQFEWEENQV SLMPGTIVKP KYNTCQLVLC IVASIVFVAG FTSGLVILFR GDSLNRYCKW
301: CHKLSYSSKS QWT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.