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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41251 Canola plasma membrane 98.23 88.5
CDY53134 Canola plasma membrane 95.39 85.67
AT4G23070.1 Thale cress plasma membrane 86.52 77.96
Bra027622.1-P Field mustard plasma membrane 60.28 54.14
Bra026997.1-P Field mustard cytosol, golgi, plasma membrane 59.57 52.66
VIT_02s0025g04130.t01 Wine grape cytosol, plasma membrane, vacuole 59.22 50.91
Bra019783.1-P Field mustard plasma membrane 53.55 49.67
PGSC0003DMT400007890 Potato plasma membrane 57.09 48.79
Solyc08g080500.2.1 Tomato cytosol, golgi, plasma membrane 57.09 48.35
Zm00001d021231_P002 Maize plasma membrane 54.96 47.84
EER99221 Sorghum cytosol, peroxisome, plasma membrane 54.96 47.69
HORVU5Hr1G080690.2 Barley plasma membrane 53.9 47.35
Zm00001d052734_P002 Maize plasma membrane 53.9 47.2
TraesCS5D01G320400.1 Wheat plasma membrane 53.55 47.19
Zm00001d006179_P002 Maize plasma membrane 54.61 47.09
Os09t0525900-01 Rice plasma membrane 53.9 47.06
TraesCS5A01G314000.1 Wheat plasma membrane 53.55 46.89
TraesCS7A01G269900.1 Wheat plasma membrane 53.55 46.75
TraesCS5B01G314900.1 Wheat plasma membrane 53.55 46.75
TraesCS4A01G179600.1 Wheat plasma membrane 31.56 46.35
Os03t0116400-01 Rice cytosol, peroxisome, plasma membrane 53.19 46.15
Os08t0546700-01 Rice plasma membrane 52.84 46.13
TraesCS7D01G270400.1 Wheat plasma membrane 53.55 46.04
Zm00001d029668_P001 Maize plasma membrane 54.26 45.81
Zm00001d029667_P001 Maize plasma membrane 54.26 45.81
TraesCS4D01G350300.1 Wheat plasma membrane 53.9 45.65
TraesCS4B01G356600.1 Wheat plasma membrane 53.9 45.51
TraesCS7B01G168100.1 Wheat plasma membrane 52.84 45.43
HORVU1Hr1G048610.3 Barley plasma membrane 52.13 45.23
TraesCS1D01G187500.1 Wheat plasma membrane 51.77 45.2
Os10t0521900-01 Rice plasma membrane 53.19 45.18
TraesCS5A01G526000.1 Wheat plasma membrane 53.19 45.18
HORVU7Hr1G056630.1 Barley plasma membrane 52.13 45.09
EER95642 Sorghum cytosol, golgi, plasma membrane 52.13 45.09
TraesCS1A01G188900.1 Wheat plasma membrane 52.13 44.95
EES11282 Sorghum cytosol 53.9 44.71
TraesCS2D01G398500.1 Wheat plasma membrane 53.19 44.25
EER94630 Sorghum cytosol, golgi, plasma membrane 52.48 44.18
TraesCS1B01G196600.1 Wheat plasma membrane 51.06 44.17
Zm00001d027355_P001 Maize plasma membrane 50.35 44.1
Bra009279.1-P Field mustard cytosol, peroxisome, plasma membrane 54.26 44.09
TraesCS2B01G419100.1 Wheat plasma membrane 52.84 44.08
TraesCS2A01G401000.1 Wheat plasma membrane 52.13 43.11
Bra005930.1-P Field mustard plasma membrane 49.65 43.08
Zm00001d002632_P001 Maize plasma membrane 51.77 42.94
Bra030374.1-P Field mustard plasma membrane 47.16 42.63
Os04t0569300-01 Rice cytosol 50.0 41.23
Bra018974.1-P Field mustard plasma membrane 45.39 40.63
Bra009280.1-P Field mustard cytosol 51.06 38.61
HORVU4Hr1G086150.3 Barley plastid 52.48 38.14
Bra028389.1-P Field mustard plasma membrane 52.48 37.09
HORVU2Hr1G095170.6 Barley mitochondrion 46.81 35.77
Bra014862.1-P Field mustard cytosol 51.77 34.43
HORVU3Hr1G029090.1 Barley plastid 15.96 29.61
HORVU0Hr1G006330.1 Barley plastid 15.96 29.61
Bra015649.1-P Field mustard plasma membrane 39.72 29.02
Protein Annotations
Gene3D:1.20.1540.10MapMan:19.4.2.6EnsemblPlantsGene:Bra013673EnsemblPlants:Bra013673.1EnsemblPlants:Bra013673.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0005575GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538InterPro:IPR035952
UniProt:M4DB13PFAM:PF01694PANTHER:PTHR22936PANTHER:PTHR22936:SF65InterPro:Peptidase_S54_rhomboidInterPro:Peptidase_S54_rhomboid_dom
InterPro:Rhomboid-like_sfSUPFAM:SSF144091TMHMM:TMhelixUniParc:UPI0002545AF2SEG:seg:
Description
AT4G23070 (E=4e-112) ATRBL7 | ATRBL7 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 7)
Coordinates
chrA01:-:7036467..7037636
Molecular Weight (calculated)
30785.1 Da
IEP (calculated)
7.722
GRAVY (calculated)
0.594
Length
282 amino acids
Sequence
(BLAST)
001: MLSTAEEDPE VGGTERRVGN RGDETTPDVR WTSWLIPVVV VANVVIFISV MYVNDCPHKS DRCLAKFLGR FSFESFKKNP LLGPSSSTLE KMGALAWGKI
101: VNKRQGWRLL TCMWLHAGVI HLLTNMFCVA FIGFRLEQQF GFVRVGTIYL VSGFCGSILS CLFLQSAISV GASSALFGLL GAMLSELLIN WTTYDNKGVA
201: LIMLLVIVGV NLGLGTLPPV DNFAHIGGFL GGFLLGFLLL IHPQFEWEEN GVSLVPGSIV KPKYNTCQFV LCIAASIVFV VG
Best Arabidopsis Sequence Match ( AT4G23070.1 )
(BLAST)
001: MLSTAAEEDP EGGSRETNNG GETTPDMQWR SWIIPIVVIA NVVVFVVVMY YNDCPHKSHR CLAKFLGRFS FESFKSNPLL GPSSSTLEKM GALAWGKIVH
101: KRQVWRLLTC MWLHAGVIHL LANMCCVAYI GVRLEQQFGF VRVGTIYLVS GFCGSILSCL FLEDAISVGA SSALFGLLGA MLSELLINWT TYDNKGVAIV
201: MLLVIVGVNL GLGTLPPVDN FAHIGGFFGG FLLGFLLLIH PQFEWEENQV SLMPGTIVKP KYNTCQLVLC IVASIVFVAG FTSGLVILFR GDSLNRYCKW
301: CHKLSYSSKS QWT
Arabidopsis Description
RBL7Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UXE9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.