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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G345400.1
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63120.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT1G63120.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT1G63120.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
AT5G07250.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT5G07250.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G270400.1 Wheat plasma membrane 98.45 96.95
TraesCS7B01G168100.1 Wheat plasma membrane 98.14 96.65
HORVU7Hr1G056630.1 Barley plasma membrane 96.28 95.4
Os08t0546700-01 Rice plasma membrane 84.83 84.83
Zm00001d052734_P002 Maize plasma membrane 80.19 80.43
TraesCS5A01G314000.1 Wheat plasma membrane 79.88 80.12
GSMUA_Achr2P03320_001 Banana cytosol, golgi, plasma membrane 66.87 67.29
GSMUA_Achr1P07920_001 Banana plasma membrane 66.56 66.98
GSMUA_Achr9P20880_001 Banana plasma membrane 65.02 65.22
KRH09112 Soybean plasma membrane 63.78 62.61
KRH38564 Soybean plasma membrane 63.47 62.12
KRG91456 Soybean cytosol, golgi, plasma membrane 62.85 61.7
PGSC0003DMT400037141 Potato cytosol, golgi, plasma membrane 60.37 61.32
VIT_02s0025g04130.t01 Wine grape cytosol, plasma membrane, vacuole 62.23 61.28
KRH35359 Soybean cytosol, golgi, plasma membrane 62.54 61.21
VIT_16s0100g00640.t01 Wine grape plasma membrane 61.3 60.92
Solyc03g026080.2.1 Tomato plasma membrane 59.75 60.69
TraesCS4A01G179600.1 Wheat plasma membrane 35.91 60.42
CDY47350 Canola plasma membrane 58.82 60.32
AT1G63120.1 Thale cress cytosol, golgi, plasma membrane 59.13 60.25
Bra027622.1-P Field mustard plasma membrane 58.51 60.19
TraesCS5A01G526000.1 Wheat plasma membrane 60.99 59.34
Bra026997.1-P Field mustard cytosol, golgi, plasma membrane 58.51 59.25
CDY67235 Canola plasma membrane 58.51 59.25
CDY45976 Canola plasma membrane 58.51 59.25
CDX98992 Canola plasma membrane 62.23 59.12
PGSC0003DMT400007890 Potato plasma membrane 60.37 59.09
CDY49197 Canola plasma membrane 58.51 58.88
Solyc08g080500.2.1 Tomato cytosol, golgi, plasma membrane 60.37 58.56
TraesCS1A01G188900.1 Wheat plasma membrane 59.13 58.41
AT5G07250.1 Thale cress plasma membrane 62.54 58.38
CDX70021 Canola plasma membrane 62.23 57.93
Bra009279.1-P Field mustard cytosol, peroxisome, plasma membrane 62.23 57.93
CDY66606 Canola plasma membrane 54.49 57.89
Bra019783.1-P Field mustard plasma membrane 54.49 57.89
AT1G12750.4 Thale cress plasma membrane 54.49 57.33
CDX78286 Canola plasma membrane 56.97 56.62
CDX70020 Canola mitochondrion, plasma membrane 56.66 56.48
Bra005930.1-P Field mustard plasma membrane 56.66 56.31
CDX81043 Canola plasma membrane 56.04 55.52
TraesCS2A01G401000.1 Wheat plasma membrane 58.2 55.13
Bra013673.1-P Field mustard plasma membrane 46.75 53.55
CDY53134 Canola plasma membrane 52.01 53.5
TraesCS4A01G176100.1 Wheat plasma membrane 52.01 53.0
CDY41251 Canola plasma membrane 51.08 52.72
AT4G23070.1 Thale cress plasma membrane 50.15 51.76
CDX98993 Canola cytosol 50.15 50.94
CDY60266 Canola plasma membrane 55.42 50.0
Bra009280.1-P Field mustard cytosol 54.49 47.19
TraesCS3A01G071500.1 Wheat plasma membrane 52.32 45.19
Protein Annotations
Gene3D:1.20.1540.10MapMan:19.4.2.6GO:GO:0003674GO:GO:0003824GO:GO:0004252GO:GO:0005575
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0019538InterPro:IPR035952PFAM:PF01694PANTHER:PTHR22936PANTHER:PTHR22936:SF62InterPro:Peptidase_S54_rhomboid
InterPro:Peptidase_S54_rhomboid_domInterPro:Rhomboid-like_sfSUPFAM:SSF144091TMHMM:TMhelixEnsemblPlantsGene:TraesCS7A01G269900EnsemblPlants:TraesCS7A01G269900.1
SEG:seg:::::
Description
No Description!
Coordinates
chr7A:-:275960475..275969457
Molecular Weight (calculated)
35709.8 Da
IEP (calculated)
8.767
GRAVY (calculated)
0.340
Length
323 amino acids
Sequence
(BLAST)
001: MASGSGSGEG KAGRAGAGYQ QYGTGYDERQ WWPWLVPTVL GACVSVFAVE MYLNDCPRHG SPLGGDARCV AGFLRQFSFQ PLRENPLLGP SSATLEKMGA
101: LDWAKVVHQH QWWRLFSCIW LHAGLIHLIV NMMSLLFIGI RLEQQFGFVR IGIIYLLSGF GGSVLSALFL RNHYISVGAS GALFGLLGCM LSELIMNWTI
201: YSNKAAAITT LLFIIAINLA IGILPHADNF AHIGGFVSGF LFGFVLLARP QFGWMERHEL PQTDQPPKYK TYQYVLWGAA LLLLLVGYVV GMAMLFKGKN
301: GNDGCHWCRY LNCVPSSRWK CST
Best Arabidopsis Sequence Match ( AT1G12750.1 )
(BLAST)
001: MRSRDMERGR KHRGDTQWTA WLTPTIVVAN VSIFIVVMYT NDCPKTTTGA NGDCVAKLLR RFSFQPLREN PFLGPSSSTL EKLGALDWKK VVQGNEKWRL
101: ITAMWLHAGI IHLVMNMFDV IIFGIRLEQQ FGFIRIGLIY LISGFGGSIL SALFLQKSIS VGASGALLGL MGAMLSELLT NWTIYKSKLC ALLSFLFIIA
201: INLAIGLLPW VDNFAHIGGL LTGFCLGFIL LMQPQSGWEE FRNSSQYGAR ARSKYNPCQY VLFFVAAVLV VAGLTVGLVM LFDGENGNKH CKWCHRLDCY
301: PTSKWSC
Arabidopsis Description
RBL6RHOMBOID-like protein 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ48]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.