Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- plasma membrane 3
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019783.1-P | Field mustard | plasma membrane | 74.27 | 75.0 |
| CDY66606 | Canola | plasma membrane | 74.27 | 75.0 |
| AT1G63120.1 | Thale cress | cytosol, golgi, plasma membrane | 67.75 | 65.62 |
| CDY60266 | Canola | plasma membrane | 75.9 | 65.08 |
| VIT_02s0025g04130.t01 | Wine grape | cytosol, plasma membrane, vacuole | 63.52 | 59.45 |
| TraesCS5D01G320400.1 | Wheat | plasma membrane | 60.26 | 57.81 |
| HORVU5Hr1G080690.2 | Barley | plasma membrane | 60.26 | 57.63 |
| Os09t0525900-01 | Rice | plasma membrane | 60.59 | 57.59 |
| TraesCS5A01G314000.1 | Wheat | plasma membrane | 60.26 | 57.45 |
| TraesCS5B01G314900.1 | Wheat | plasma membrane | 60.26 | 57.28 |
| Zm00001d021231_P002 | Maize | plasma membrane | 60.26 | 57.1 |
| TraesCS4A01G179600.1 | Wheat | plasma membrane | 35.5 | 56.77 |
| EER99221 | Sorghum | cytosol, peroxisome, plasma membrane | 59.93 | 56.62 |
| Zm00001d006179_P002 | Maize | plasma membrane | 60.26 | 56.57 |
| PGSC0003DMT400007890 | Potato | plasma membrane | 58.96 | 54.85 |
| Os10t0521900-01 | Rice | plasma membrane | 58.96 | 54.52 |
| TraesCS7A01G269900.1 | Wheat | plasma membrane | 57.33 | 54.49 |
| Os08t0546700-01 | Rice | plasma membrane | 57.0 | 54.18 |
| Zm00001d052734_P002 | Maize | plasma membrane | 56.68 | 54.04 |
| TraesCS1A01G188900.1 | Wheat | plasma membrane | 57.33 | 53.82 |
| Solyc08g080500.2.1 | Tomato | cytosol, golgi, plasma membrane | 58.31 | 53.75 |
| HORVU7Hr1G056630.1 | Barley | plasma membrane | 57.0 | 53.68 |
| TraesCS7B01G168100.1 | Wheat | plasma membrane | 57.33 | 53.66 |
| TraesCS7D01G270400.1 | Wheat | plasma membrane | 57.33 | 53.66 |
| TraesCS1D01G187500.1 | Wheat | plasma membrane | 56.35 | 53.56 |
| AT4G23070.1 | Thale cress | plasma membrane | 54.07 | 53.04 |
| Zm00001d029667_P001 | Maize | plasma membrane | 57.65 | 52.99 |
| Zm00001d029668_P001 | Maize | plasma membrane | 57.65 | 52.99 |
| Os03t0116400-01 | Rice | cytosol, peroxisome, plasma membrane | 56.03 | 52.92 |
| HORVU1Hr1G048610.3 | Barley | plasma membrane | 56.03 | 52.92 |
| EER94630 | Sorghum | cytosol, golgi, plasma membrane | 57.65 | 52.84 |
| TraesCS1B01G196600.1 | Wheat | plasma membrane | 56.03 | 52.76 |
| AT5G07250.1 | Thale cress | plasma membrane | 58.96 | 52.31 |
| TraesCS2B01G419100.1 | Wheat | plasma membrane | 57.33 | 52.07 |
| EES11282 | Sorghum | cytosol | 57.33 | 51.76 |
| TraesCS2D01G398500.1 | Wheat | plasma membrane | 56.68 | 51.33 |
| TraesCS2A01G401000.1 | Wheat | plasma membrane | 57.0 | 51.32 |
| TraesCS5A01G526000.1 | Wheat | plasma membrane | 55.37 | 51.2 |
| TraesCS4D01G350300.1 | Wheat | plasma membrane | 55.05 | 50.75 |
| Zm00001d002632_P001 | Maize | plasma membrane | 55.7 | 50.29 |
| Os04t0569300-01 | Rice | cytosol | 55.7 | 50.0 |
| TraesCS4B01G356600.1 | Wheat | plasma membrane | 53.75 | 49.4 |
| EER95642 | Sorghum | cytosol, golgi, plasma membrane | 51.79 | 48.77 |
| Zm00001d027355_P001 | Maize | plasma membrane | 50.81 | 48.45 |
| AT2G29050.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 57.98 | 45.76 |
| AT1G52580.1 | Thale cress | cytosol, golgi, plasma membrane | 43.65 | 43.37 |
| HORVU4Hr1G086150.3 | Barley | plastid | 54.4 | 43.04 |
| AT3G53780.2 | Thale cress | plasma membrane | 53.09 | 41.37 |
| HORVU2Hr1G095170.6 | Barley | mitochondrion | 46.58 | 38.75 |
| HORVU0Hr1G006330.1 | Barley | plastid | 15.96 | 32.24 |
| HORVU3Hr1G029090.1 | Barley | plastid | 15.96 | 32.24 |
| AT1G77860.2 | Thale cress | nucleus, peroxisome, plasma membrane | 40.07 | 31.95 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | EntrezGene:837831 | ProteinID:AAF88090.1 | ProteinID:AEE28921.1 | ProteinID:AEE28923.1 |
| ProteinID:ANM60285.1 | ProteinID:ANM60286.1 | ProteinID:ANM60288.1 | ArrayExpress:AT1G12750 | EnsemblPlantsGene:AT1G12750 | RefSeq:AT1G12750 |
| TAIR:AT1G12750 | RefSeq:AT1G12750-TAIR-G | EnsemblPlants:AT1G12750.4 | Symbol:ATRBL6 | EMBL:AY065251 | EMBL:AY091318 |
| Unigene:At.28545 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0031966 |
| InterPro:IPR035952 | RefSeq:NP_001184975.1 | RefSeq:NP_001322583.1 | RefSeq:NP_001322584.1 | RefSeq:NP_001322586.1 | RefSeq:NP_172735.1 |
| PFAM:PF01694 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF63 | InterPro:Peptidase_S54_rhomboid | InterPro:Peptidase_S54_rhomboid_dom | UniProt:Q8VZ48 |
| Symbol:RBL6 | InterPro:Rhomboid-like_sf | MEROPS:S54.A04 | SUPFAM:SSF144091 | TMHMM:TMhelix | UniParc:UPI00000A7822 |
| SEG:seg | : | : | : | : | : |
Description
RBL6RHOMBOID-like protein 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ48]
Coordinates
chr1:-:4344943..4348390
Molecular Weight (calculated)
34291.4 Da
IEP (calculated)
9.475
GRAVY (calculated)
0.355
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSRDMERGR KHRGDTQWTA WLTPTIVVAN VSIFIVVMYT NDCPKTTTGA NGDCVAKLLR RFSFQPLREN PFLGPSSSTL EKLGALDWKK VVQGNEKWRL
101: ITAMWLHAGI IHLVMNMFDV IIFGIRLEQQ FGFIRIGLIY LISGFGGSIL SALFLQKSIS VGASGALLGL MGAMLSELLT NWTIYKSKLC ALLSFLFIIA
201: INLAIGLLPW VDNFAHIGGL LTGFCLGFIL LMQPQSGWEE FRNSSQYGAR ARSKYNPCQY VLFFVAAVLV VAGLTVGLVM LFDGENGNKH CKWCHRLDCY
301: PTSKWSC
101: ITAMWLHAGI IHLVMNMFDV IIFGIRLEQQ FGFIRIGLIY LISGFGGSIL SALFLQKSIS VGASGALLGL MGAMLSELLT NWTIYKSKLC ALLSFLFIIA
201: INLAIGLLPW VDNFAHIGGL LTGFCLGFIL LMQPQSGWEE FRNSSQYGAR ARSKYNPCQY VLFFVAAVLV VAGLTVGLVM LFDGENGNKH CKWCHRLDCY
301: PTSKWSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.