Factsheet for AT1G63120.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026997.1-P	Field mustard	cytosol, golgi, plasma membrane	91.17	90.6
CDY45976	Canola	plasma membrane	90.85	90.28
CDY67235	Canola	plasma membrane	90.22	89.66
CDY47350	Canola	plasma membrane	88.33	88.89
Bra027622.1-P	Field mustard	plasma membrane	88.01	88.85
CDY49197	Canola	plasma membrane	88.01	86.92
AT1G12750.4	Thale cress	plasma membrane	65.62	67.75
VIT_02s0025g04130.t01	Wine grape	cytosol, plasma membrane, vacuole	70.03	67.68
PGSC0003DMT400007890	Potato	plasma membrane	67.82	65.15
Os09t0525900-01	Rice	plasma membrane	66.25	65.02
TraesCS5D01G320400.1	Wheat	plasma membrane	64.98	64.38
Solyc08g080500.2.1	Tomato	cytosol, golgi, plasma membrane	67.51	64.26
Zm00001d021231_P002	Maize	plasma membrane	65.62	64.2
HORVU5Hr1G080690.2	Barley	plasma membrane	64.98	64.17
TraesCS5A01G314000.1	Wheat	plasma membrane	64.98	63.98
TraesCS5B01G314900.1	Wheat	plasma membrane	64.98	63.78
Zm00001d052734_P002	Maize	plasma membrane	64.67	63.66
Os08t0546700-01	Rice	plasma membrane	64.35	63.16
EER99221	Sorghum	cytosol, peroxisome, plasma membrane	64.67	63.08
Zm00001d006179_P002	Maize	plasma membrane	64.67	62.69
TraesCS4A01G179600.1	Wheat	plasma membrane	37.54	61.98
Os03t0116400-01	Rice	cytosol, peroxisome, plasma membrane	63.41	61.85
Os10t0521900-01	Rice	plasma membrane	64.04	61.14
TraesCS1A01G188900.1	Wheat	plasma membrane	61.51	59.63
Zm00001d029668_P001	Maize	plasma membrane	62.78	59.58
Zm00001d029667_P001	Maize	plasma membrane	62.78	59.58
TraesCS1D01G187500.1	Wheat	plasma membrane	60.57	59.44
HORVU7Hr1G056630.1	Barley	plasma membrane	60.88	59.2
TraesCS7A01G269900.1	Wheat	plasma membrane	60.25	59.13
TraesCS7B01G168100.1	Wheat	plasma membrane	60.57	58.54
TraesCS7D01G270400.1	Wheat	plasma membrane	60.57	58.54
TraesCS5A01G526000.1	Wheat	plasma membrane	61.2	58.43
TraesCS1B01G196600.1	Wheat	plasma membrane	59.94	58.28
EER94630	Sorghum	cytosol, golgi, plasma membrane	61.51	58.21
AT5G07250.1	Thale cress	plasma membrane	63.41	58.09
TraesCS4B01G356600.1	Wheat	plasma membrane	61.2	58.08
TraesCS4D01G350300.1	Wheat	plasma membrane	60.88	57.96
EES11282	Sorghum	cytosol	62.15	57.94
EER95642	Sorghum	cytosol, golgi, plasma membrane	59.31	57.67
HORVU1Hr1G048610.3	Barley	plasma membrane	58.99	57.54
Zm00001d027355_P001	Maize	plasma membrane	58.36	57.45
AT4G23070.1	Thale cress	plasma membrane	55.52	56.23
Zm00001d002632_P001	Maize	plasma membrane	60.25	56.18
TraesCS2A01G401000.1	Wheat	plasma membrane	60.25	56.01
TraesCS2B01G419100.1	Wheat	plasma membrane	59.62	55.92
TraesCS2D01G398500.1	Wheat	plasma membrane	59.62	55.75
Os04t0569300-01	Rice	cytosol	58.04	53.8
AT2G29050.1	Thale cress	golgi, peroxisome, plasma membrane, plastid	62.78	51.16
HORVU4Hr1G086150.3	Barley	plastid	60.57	49.48
AT1G52580.1	Thale cress	cytosol, golgi, plasma membrane	47.0	48.22
AT3G53780.2	Thale cress	plasma membrane	57.73	46.45
HORVU2Hr1G095170.6	Barley	mitochondrion	50.16	43.09
HORVU0Hr1G006330.1	Barley	plastid	17.98	37.5
HORVU3Hr1G029090.1	Barley	plastid	17.98	37.5
AT1G77860.2	Thale cress	nucleus, peroxisome, plasma membrane	39.12	32.21

Protein Annotations

Gene3D:1.20.1540.10	MapMan:19.4.2.6	EntrezGene:842616	ProteinID:AAG51610.1	EMBL:AB195671	ProteinID:AEE34058.1
ArrayExpress:AT1G63120	EnsemblPlantsGene:AT1G63120	RefSeq:AT1G63120	TAIR:AT1G63120	RefSeq:AT1G63120-TAIR-G	EnsemblPlants:AT1G63120.1
TAIR:AT1G63120.1	Symbol:ATRBL2	EMBL:BT004076	EMBL:BT005121	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008236
GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR035952
RefSeq:NP_176500.1	PFAM:PF01694	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR22936	PANTHER:PTHR22936:SF63	InterPro:Peptidase_S54_rhomboid
InterPro:Peptidase_S54_rhomboid_dom	UniProt:Q9CAN1	InterPro:Rhomboid-like_sf	MEROPS:S54.015	SUPFAM:SSF144091	TMHMM:TMhelix
UniParc:UPI000000C268	SEG:seg	:	:	:	:

Description

RBL2RHOMBOID-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN1]

Coordinates

chr1:-:23408804..23411139

Molecular Weight (calculated)

35414.8 Da

IEP (calculated)

9.683

GRAVY (calculated)

0.391

Length

317 amino acids

Sequence
(BLAST)

001: MANRDVERVG KKNRGANNNY FYEESSGETH WTSWLIPAIV VANLAVFIAV MFVNDCPKKI TGPNKECVAR FLGRFSFQPL KENPLFGPSS STLEKMGALE
101: WRKVVHEHQG WRLLSCMWLH AGIIHLLTNM LSLIFIGIRL EQQFGFIRVG LIYLISGLGG SILSSLFLQE SISVGASGAL FGLLGAMLSE LLTNWTIYAN
201: KAAALITLLF IIAINLALGM LPRVDNFAHI GGFLTGFCLG FVLLVRPQYG WEASRTNTSR TKRKYSMYQY VLFVVSVVLL VVGLTVALVM LFKGENGNKH
301: CKWCHYLSCF PTSKWTC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.