Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98992 | Canola | plasma membrane | 81.79 | 83.24 |
| CDX70021 | Canola | plasma membrane | 82.95 | 82.71 |
| Bra009279.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 82.95 | 82.71 |
| CDX78286 | Canola | plasma membrane | 71.97 | 76.62 |
| Bra005930.1-P | Field mustard | plasma membrane | 71.68 | 76.31 |
| CDX81043 | Canola | plasma membrane | 70.81 | 75.15 |
| CDX70020 | Canola | mitochondrion, plasma membrane | 69.08 | 73.77 |
| CDX98993 | Canola | cytosol | 64.45 | 70.13 |
| KRH09112 | Soybean | plasma membrane | 64.16 | 67.48 |
| VIT_16s0100g00640.t01 | Wine grape | plasma membrane | 63.29 | 67.38 |
| PGSC0003DMT400037141 | Potato | cytosol, golgi, plasma membrane | 61.56 | 66.98 |
| Solyc03g026080.2.1 | Tomato | plasma membrane | 60.98 | 66.35 |
| KRH38564 | Soybean | plasma membrane | 63.01 | 66.06 |
| KRG91456 | Soybean | cytosol, golgi, plasma membrane | 62.43 | 65.65 |
| TraesCS5D01G320400.1 | Wheat | plasma membrane | 60.69 | 65.62 |
| Bra009280.1-P | Field mustard | cytosol | 70.52 | 65.42 |
| Os09t0525900-01 | Rice | plasma membrane | 60.98 | 65.33 |
| TraesCS5A01G314000.1 | Wheat | plasma membrane | 60.69 | 65.22 |
| HORVU5Hr1G080690.2 | Barley | plasma membrane | 60.4 | 65.11 |
| TraesCS5B01G314900.1 | Wheat | plasma membrane | 60.69 | 65.02 |
| KRH35359 | Soybean | cytosol, golgi, plasma membrane | 61.85 | 64.85 |
| Zm00001d052734_P002 | Maize | plasma membrane | 60.12 | 64.6 |
| Zm00001d021231_P002 | Maize | plasma membrane | 60.4 | 64.51 |
| EER99221 | Sorghum | cytosol, peroxisome, plasma membrane | 60.4 | 64.31 |
| Zm00001d006179_P002 | Maize | plasma membrane | 60.4 | 63.91 |
| Os08t0546700-01 | Rice | plasma membrane | 59.54 | 63.78 |
| AT1G63120.1 | Thale cress | cytosol, golgi, plasma membrane | 58.09 | 63.41 |
| GSMUA_Achr11P... | Banana | cytosol | 61.27 | 63.1 |
| Os10t0521900-01 | Rice | plasma membrane | 60.12 | 62.65 |
| TraesCS7A01G269900.1 | Wheat | plasma membrane | 58.38 | 62.54 |
| TraesCS7B01G168100.1 | Wheat | plasma membrane | 59.25 | 62.5 |
| TraesCS7D01G270400.1 | Wheat | plasma membrane | 59.25 | 62.5 |
| Os03t0116400-01 | Rice | cytosol, peroxisome, plasma membrane | 58.38 | 62.15 |
| Zm00001d029667_P001 | Maize | plasma membrane | 59.83 | 61.98 |
| Zm00001d029668_P001 | Maize | plasma membrane | 59.83 | 61.98 |
| HORVU7Hr1G056630.1 | Barley | plasma membrane | 58.38 | 61.96 |
| TraesCS1D01G187500.1 | Wheat | plasma membrane | 57.51 | 61.61 |
| HORVU1Hr1G048610.3 | Barley | plasma membrane | 57.8 | 61.54 |
| TraesCS4A01G179600.1 | Wheat | plasma membrane | 34.1 | 61.46 |
| TraesCS1B01G196600.1 | Wheat | plasma membrane | 57.8 | 61.35 |
| EER94630 | Sorghum | cytosol, golgi, plasma membrane | 58.67 | 60.6 |
| TraesCS1A01G188900.1 | Wheat | plasma membrane | 56.65 | 59.94 |
| TraesCS5A01G526000.1 | Wheat | plasma membrane | 57.23 | 59.64 |
| EER95642 | Sorghum | cytosol, golgi, plasma membrane | 56.07 | 59.51 |
| AT1G12750.4 | Thale cress | plasma membrane | 52.31 | 58.96 |
| TraesCS4D01G350300.1 | Wheat | plasma membrane | 56.65 | 58.86 |
| TraesCS4B01G356600.1 | Wheat | plasma membrane | 56.65 | 58.68 |
| Zm00001d027355_P001 | Maize | plasma membrane | 53.76 | 57.76 |
| EES11282 | Sorghum | cytosol | 56.07 | 57.06 |
| Zm00001d002632_P001 | Maize | plasma membrane | 55.2 | 56.18 |
| TraesCS2D01G398500.1 | Wheat | plasma membrane | 54.62 | 55.75 |
| TraesCS2A01G401000.1 | Wheat | plasma membrane | 54.62 | 55.43 |
| TraesCS2B01G419100.1 | Wheat | plasma membrane | 54.05 | 55.33 |
| Os04t0569300-01 | Rice | cytosol | 54.62 | 55.26 |
| AT4G23070.1 | Thale cress | plasma membrane | 48.55 | 53.67 |
| HORVU4Hr1G086150.3 | Barley | plastid | 56.65 | 50.52 |
| AT2G29050.1 | Thale cress | golgi, peroxisome, plasma membrane, plastid | 56.07 | 49.87 |
| AT1G52580.1 | Thale cress | cytosol, golgi, plasma membrane | 42.77 | 47.9 |
| AT3G53780.2 | Thale cress | plasma membrane | 51.45 | 45.18 |
| HORVU2Hr1G095170.6 | Barley | mitochondrion | 43.64 | 40.92 |
| HORVU0Hr1G006330.1 | Barley | plastid | 17.92 | 40.79 |
| HORVU3Hr1G029090.1 | Barley | plastid | 17.92 | 40.79 |
| AT1G77860.2 | Thale cress | nucleus, peroxisome, plasma membrane | 37.57 | 33.77 |
Protein Annotations
| Gene3D:1.20.1540.10 | MapMan:19.4.2.6 | EntrezGene:830616 | UniProt:A0A178UBV1 | ProteinID:AED91127.1 | ProteinID:AED91128.1 |
| ArrayExpress:AT5G07250 | EnsemblPlantsGene:AT5G07250 | RefSeq:AT5G07250 | TAIR:AT5G07250 | RefSeq:AT5G07250-TAIR-G | EnsemblPlants:AT5G07250.1 |
| TAIR:AT5G07250.1 | Symbol:ATRBL3 | EMBL:AY058157 | EMBL:AY098983 | Unigene:At.71052 | ProteinID:CAB87281.1 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR035952 | RefSeq:NP_001119182.1 | RefSeq:NP_196342.1 | ProteinID:OAO91145.1 | PFAM:PF01694 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR22936 | PANTHER:PTHR22936:SF62 | InterPro:Peptidase_S54_rhomboid |
| InterPro:Peptidase_S54_rhomboid_dom | UniProt:Q9LYP1 | InterPro:Rhomboid-like_sf | MEROPS:S54.A02 | SUPFAM:SSF144091 | TMHMM:TMhelix |
| UniParc:UPI00000A19A4 | SEG:seg | : | : | : | : |
Description
RBL3Rhomboid-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UBV1]
Coordinates
chr5:-:2274260..2276039
Molecular Weight (calculated)
38493.4 Da
IEP (calculated)
9.472
GRAVY (calculated)
0.386
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGDDDLEN RMSAKDRGIG SRGGDRNRIG PPPLPVALSS STEFGDNALS SRWTSWLVPM FVVANVAVFV VAMFVNNCPN HFESHRLRGH CVAKFLGRLS
101: FEPLRTNPLF GPSSHTLEKL GALEWSKVVE KKEGWRLLTC IWLHAGVIHL GANMLSLVFI GIRLEQQFGF VRIGVIYLLS GIGGSVLSSL FIRNSISVGA
201: SGALFGLLGS MLSELFTNWT IYSNKIAALL TLLFVILINL AIGILPHVDN FAHVGGFVTG FLLGFILLAR PQFKWLAREH MPQGTPLRYK YKTYQYLLWL
301: LSLVLLIAGF VVALLMLFRG ENGNDHCRWC HYLRCVPTSS WRCDDV
101: FEPLRTNPLF GPSSHTLEKL GALEWSKVVE KKEGWRLLTC IWLHAGVIHL GANMLSLVFI GIRLEQQFGF VRIGVIYLLS GIGGSVLSSL FIRNSISVGA
201: SGALFGLLGS MLSELFTNWT IYSNKIAALL TLLFVILINL AIGILPHVDN FAHVGGFVTG FLLGFILLAR PQFKWLAREH MPQGTPLRYK YKTYQYLLWL
301: LSLVLLIAGF VVALLMLFRG ENGNDHCRWC HYLRCVPTSS WRCDDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.