Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 28.12 | 28.12 |
| CDY20051 | Canola | cytosol | 45.83 | 22.0 |
| CDY48359 | Canola | cytosol | 45.83 | 22.0 |
| GSMUA_Achr11P... | Banana | cytosol | 45.83 | 21.89 |
| CDY00158 | Canola | cytosol | 43.75 | 20.69 |
| KRH07075 | Soybean | cytosol | 45.83 | 18.8 |
| Bra039082.1-P | Field mustard | mitochondrion | 43.75 | 18.67 |
| GSMUA_Achr7P02800_001 | Banana | mitochondrion | 37.5 | 17.48 |
| GSMUA_Achr11P... | Banana | mitochondrion | 50.0 | 16.96 |
| AT3G27380.1 | Thale cress | mitochondrion | 47.92 | 16.49 |
| CDX83688 | Canola | mitochondrion | 47.92 | 16.49 |
| AT5G40650.1 | Thale cress | mitochondrion | 47.92 | 16.43 |
| CDY34152 | Canola | mitochondrion | 47.92 | 16.37 |
| CDY13709 | Canola | mitochondrion | 47.92 | 16.37 |
| KRG94380 | Soybean | mitochondrion | 45.83 | 15.88 |
| VIT_14s0219g00150.t01 | Wine grape | mitochondrion | 46.88 | 11.22 |
| GSMUA_Achr7P02810_001 | Banana | extracellular, vacuole | 13.54 | 8.55 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P03950_001 | EnsemblPlants:GSMUA_Achr10T03950_001 | EnsemblPlantsGene:GSMUA_Achr10G03950_001 | Gene3D:1.10.1060.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0051536 | InterPro:Helical_ferredxn | InterPro:IPR009051 | PANTHER:PTHR11921 | PANTHER:PTHR11921:SF23 | UniParc:UPI0002969530 |
| UniProt:M0RF72 | MapMan:35.1 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G03950_001]
Coordinates
chr10:+:13471151..13473238
Molecular Weight (calculated)
10348.1 Da
IEP (calculated)
7.043
GRAVY (calculated)
-0.383
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSPVQERG VVVQDSTKDR AKLDGMCESI LCACCSTSYP SYSWNPETYR GPAALLHSNR SKVISSISVN STFALGQKEG SCCKEFLQAS SSKEES
001: MAFGLIGRVV GTKSSRLSTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT FQIYRWNPDN PGKPELQDYK IDLKDCGPMV LDALIKIKNE MDPSLTFRRS
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANR
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANR
Arabidopsis Description
SDH2-2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.