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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 4
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67470 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 37.81 85.39
PGSC0003DMT400064279 Potato cytosol 47.76 84.96
GSMUA_Achr11P... Banana cytosol, extracellular 32.84 68.75
GSMUA_Achr11P... Banana mitochondrion 93.53 66.43
Solyc02g092730.2.1 Tomato cytosol, nucleus 80.6 63.78
Solyc02g093680.2.1 Tomato extracellular, mitochondrion, plastid 83.58 61.31
PGSC0003DMT400032862 Potato mitochondrion 83.08 60.95
GSMUA_Achr7P02800_001 Banana mitochondrion 52.74 51.46
CDY11704 Canola cytosol 15.42 47.69
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 21.89 45.83
VIT_14s0219g00150.t01 Wine grape mitochondrion 85.07 42.64
KRH33590 Soybean cytosol 35.32 41.28
GSMUA_Achr7P02810_001 Banana extracellular, vacuole 30.85 40.79
HORVU5Hr1G057270.1 Barley cytosol, mitochondrion, plastid 16.92 36.96
CDX67469 Canola mitochondrion 17.91 31.58
Protein Annotations
KEGG:00020+1.3.5.1KEGG:00190+1.3.5.1KEGG:00650+1.3.5.1KEGG:00720+1.3.5.1Gene3D:1.10.1060.10MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BSGene3D:3.10.20.30InterPro:4Fe4S_Fe-S-bdInterPro:4Fe4S_Fe_S_CS
InterPro:Beta-grasp_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006091GO:GO:0006099
GO:GO:0008150GO:GO:0008152GO:GO:0008177GO:GO:0009055GO:GO:0009987GO:GO:0016020
GO:GO:0016491GO:GO:0022900GO:GO:0046872GO:GO:0051536GO:GO:0051537GO:GO:0051538
GO:GO:0051539GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr11G19160_001EnsemblPlants:GSMUA_Achr11P19160_001EnsemblPlants:GSMUA_Achr11T19160_001InterPro:Helical_ferredxn
InterPro:IPR001041InterPro:IPR009051InterPro:IPR012675InterPro:IPR017896UniProt:M0RTJ6PFAM:PF13085
PFAM:PF13534ScanProsite:PS00197ScanProsite:PS00198PFscan:PS51085PFscan:PS51379PANTHER:PTHR11921
PANTHER:PTHR11921:SF29SUPFAM:SSF46548SUPFAM:SSF54292InterPro:Succ_DH/fum_Rdtase_Fe-SInterPro:Succ_DH/fum_Rdtase_NTIGRFAMs:TIGR00384
UniParc:UPI0002964AB2SEG:seg::::
Description
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr11G19160_001]
Coordinates
chr11:+:20397859..20400954
Molecular Weight (calculated)
22768.6 Da
IEP (calculated)
8.152
GRAVY (calculated)
-0.409
Length
201 amino acids
Sequence
(BLAST)
001: MVLDALIKIK NEMDPSLTFR RSCREGICGS CAMNIDGDNG LACLTKIPAS SAATTITPLP HMYVIKDLVV DMTNFYNQYK SVEPWLKRKD PPPTPPKEIP
101: QSKKDRAKLD GMYECILCAC CSTSCPSYWW NPEAYLGPAA LLHAHRWIQD SRDQYTKERL DAVNDEFKLY RCHTIMNCAH ACPKGLNPAK QIESIKKLQL
201: Q
Best Arabidopsis Sequence Match ( AT5G40650.1 )
(BLAST)
001: MAFGLIGRVV GTKSSRLSTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT FQIYRWNPDN PGKPELQDYK IDLKDCGPMV LDALIKIKNE MDPSLTFRRS
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANRWISDSR DEYTKERLEA IDDEFKLYRC HTILNCARAC PKGLNPGKQI THIKQLQKSG
Arabidopsis Description
SDH2-2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB02]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.