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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400064279 Potato cytosol 34.88 53.1
CDX67469 Canola mitochondrion 29.65 44.74
KRH07075 Soybean cytosol 56.4 41.45
HORVU5Hr1G057270.1 Barley cytosol, mitochondrion, plastid 22.09 41.3
Zm00001d045148_P001 Maize mitochondrion 33.72 40.56
GSMUA_Achr7P02800_001 Banana mitochondrion 47.67 39.81
CDY11704 Canola cytosol 13.95 36.92
KRG94380 Soybean mitochondrion 58.72 36.46
GSMUA_Achr11P... Banana cytosol 41.28 35.32
Solyc02g093680.2.1 Tomato extracellular, mitochondrion, plastid 53.49 33.58
PGSC0003DMT400032862 Potato mitochondrion 53.49 33.58
GSMUA_Achr11P... Banana mitochondrion 51.16 31.1
Solyc02g092730.2.1 Tomato cytosol, nucleus 39.53 26.77
Zm00001d011333_P001 Maize cytosol, golgi, mitochondrion 21.51 26.62
OQU79812 Sorghum mitochondrion 48.26 23.58
Os08t0120000-05 Rice mitochondrion 47.67 23.43
HORVU7Hr1G074890.6 Barley mitochondrion 47.67 23.43
VIT_14s0219g00150.t01 Wine grape mitochondrion 53.49 22.94
TraesCS7A01G314000.1 Wheat mitochondrion 47.67 22.4
TraesCS7B01G214900.1 Wheat mitochondrion 47.67 22.4
TraesCS7D01G311200.1 Wheat mitochondrion 47.67 22.4
Zm00001d035136_P001 Maize mitochondrion 48.84 20.69
Zm00001d049649_P001 Maize mitochondrion 48.84 20.64
CDX67470 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 5.23 10.11
GSMUA_Achr7P02810_001 Banana extracellular, vacuole 8.14 9.21
GSMUA_Achr11P... Banana cytosol, extracellular 4.65 8.33
Os09t0370200-01 Rice mitochondrion 9.88 5.99
Protein Annotations
KEGG:00020+1.3.5.1KEGG:00190+1.3.5.1KEGG:00650+1.3.5.1KEGG:00720+1.3.5.1EntrezGene:102661752MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BSGene3D:3.10.20.30UniProt:A0A0R0HSZ4EMBL:ACUP02006536
InterPro:Beta-grasp_dom_sfEnsemblPlantsGene:GLYMA_10G134200GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006091GO:GO:0006099
GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009060GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0022900GO:GO:0022904GO:GO:0051536GO:GO:0051537
GO:GO:0055114InterPro:IPR001041InterPro:IPR012675EnsemblPlants:KRH33590ProteinID:KRH33590ProteinID:KRH33590.1
PFAM:PF13085ScanProsite:PS00197PFscan:PS51085PANTHER:PTHR11921MetaCyc:PWY-3781MetaCyc:PWY-4302
MetaCyc:PWY-561MetaCyc:PWY-5690MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7254MetaCyc:PWY-7279
SUPFAM:SSF54292InterPro:Succ_DH/fum_Rdtase_Fe-SInterPro:Succ_DH/fum_Rdtase_NTIGRFAMs:TIGR00384TMHMM:TMhelixUniParc:UPI0006EE185B
Description
hypothetical protein
Coordinates
chr10:-:35995072..35999502
Molecular Weight (calculated)
19828.4 Da
IEP (calculated)
9.072
GRAVY (calculated)
-0.144
Length
172 amino acids
Sequence
(BLAST)
001: MSEVQAQQVE PKARESPTRK IPTLKTFQIY RWNPKNPSKH KVKDYQINLK EGGPMVLDAL NNIQNKIDPS LTFRRSCREG ICGSCAMNID DYNNIACLTK
101: IPLEKNSAAM TITPLPHMFV IKDLVMDMTN FYTNLREVMI CATILVYCSY RWFHIPGIVI RFFLTFNLSS LC
Best Arabidopsis Sequence Match ( AT5G40650.2 )
(BLAST)
001: MAFGLIGRVV GTKSSRLSTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT FQIYRWNPDN PGKPELQDYK IDLKDCGPMV LDALIKIKNE MDPSLTFRRS
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANR
Arabidopsis Description
SDH2-2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB02]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.