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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
 mitochondrion: 27297264
mitochondrion: 29575040
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035136_P001 Maize mitochondrion 94.84 95.07
Zm00001d045148_P001 Maize mitochondrion 30.71 87.41
CDX67470 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 18.67 85.39
PGSC0003DMT400064279 Potato cytosol 23.1 83.19
Zm00001d011333_P001 Maize cytosol, golgi, mitochondrion 28.01 82.01
Bra028469.1-P Field mustard cytosol 40.29 81.59
PGSC0003DMT400032862 Potato mitochondrion 48.16 71.53
Solyc02g093680.2.1 Tomato extracellular, mitochondrion, plastid 47.91 71.17
Bra025272.1-P Field mustard mitochondrion 47.91 69.39
AT3G27380.1 Thale cress mitochondrion 47.42 69.18
Bra033006.1-P Field mustard mitochondrion 47.67 69.04
AT5G40650.1 Thale cress mitochondrion 47.42 68.93
Bra039082.1-P Field mustard mitochondrion 38.08 68.89
Solyc02g092730.2.1 Tomato cytosol, nucleus 39.07 62.6
CDX67469 Canola mitochondrion 16.22 57.89
VIT_14s0219g00150.t01 Wine grape mitochondrion 49.63 50.37
KRH33590 Soybean cytosol 20.64 48.84
Zm00001d005663_P001 Maize mitochondrion 36.12 47.88
CDY11704 Canola cytosol 7.37 46.15
GSMUA_Achr7P02810_001 Banana extracellular, vacuole 15.48 41.45
Protein Annotations
KEGG:00020+1.3.5.1KEGG:00190+1.3.5.1KEGG:00650+1.3.5.1KEGG:00720+1.3.5.1Gene3D:1.10.1060.10EntrezGene:100502233
MapMan:17.7.1.2.12MapMan:2.3.6.1.2InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BSGene3D:3.10.20.30
Gene3D:4.10.830.10InterPro:4Fe4S_Fe-S-bdInterPro:4Fe4S_Fe_S_CSProteinID:AQK51001.1InterPro:Beta-grasp_dom_sfGO:GO:0003674
GO:GO:0003735GO:GO:0003824GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0005840GO:GO:0006091
GO:GO:0006099GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0008177GO:GO:0009055
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0019538GO:GO:0022900
GO:GO:0046872GO:GO:0051536GO:GO:0051537GO:GO:0051538GO:GO:0051539GO:GO:0055114
InterPro:Helical_ferredxnInterPro:IPR001041InterPro:IPR009051InterPro:IPR012675InterPro:IPR017896UniProt:K7U1I2
PFAM:PF00253PFAM:PF13085ScanProsite:PS00197ScanProsite:PS00198ScanProsite:PS00527PFscan:PS51085
PFscan:PS51379PANTHER:PTHR11921PANTHER:PTHR11921:SF29InterPro:Ribosomal_S14InterPro:Ribosomal_S14_CSSUPFAM:SSF46548
SUPFAM:SSF54292SUPFAM:SSF57716InterPro:Succ_DH/fum_Rdtase_Fe-SInterPro:Succ_DH/fum_Rdtase_NTIGRFAMs:TIGR00384UniParc:UPI0002213115
EnsemblPlantsGene:Zm00001d049649EnsemblPlants:Zm00001d049649_P001EnsemblPlants:Zm00001d049649_T001SEG:seg::
Description
succinate dehydrogenase2 succinate dehydrogenase2
Coordinates
chr4:+:38706344..38709739
Molecular Weight (calculated)
46055.0 Da
IEP (calculated)
10.266
GRAVY (calculated)
-0.530
Length
407 amino acids
Sequence
(BLAST)
001: MAAALLRRSP AVRALLSPAL SSRLVASKPH SSSPAPPPPA KAASSTKTFS IYRWDPDSPS TKPHLKDYQV DLSDCGPMVL DALLKIKNEQ DPSLTFRRSC
101: REGICGSCAM NIDGDNGLAC LTKISGASSA STVSPLPHMF VVKDLVVDMT NFYSQYKSVE PWLKRKDQPP QQGKEIPQTK ADRAKLDGMY ECILCACCST
201: SCPSYWWNPE EYLGPAALLH ANRLPLWGTL IKPKPNMFMH LQARGYHGVS EKRNLRDHKR RLLAEKYELR GKMYKAVCRD PDLPLDMREK FRYKLSKLPR
301: NSSMTRLRNR CIFTGRSRAV YKKFRMSRIV FRTLANKGEL MGVKKASWWI QDSRDQFTKE RLDAINDEFK LYRCHTIKNC THACPKGLNP AKQIDTIKKL
401: QLGAPSA
Best Arabidopsis Sequence Match ( AT3G27380.1 )
(BLAST)
001: MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD NPGKPELQNY QIDLKDCGPM VLDALIKIKN EMDPSLTFRR
101: SCREGICGSC AMNIDGCNGL ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC
201: STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR
Arabidopsis Description
SDH2-1Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.