Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028469.1-P | Field mustard | cytosol | 69.64 | 97.01 |
| AT3G27380.1 | Thale cress | mitochondrion | 91.43 | 91.76 |
| PGSC0003DMT400064279 | Potato | cytosol | 36.43 | 90.27 |
| KRH07075 | Soybean | cytosol | 70.0 | 83.76 |
| Solyc02g093680.2.1 | Tomato | extracellular, mitochondrion, plastid | 77.5 | 79.2 |
| PGSC0003DMT400032862 | Potato | mitochondrion | 77.5 | 79.2 |
| KRG94380 | Soybean | mitochondrion | 78.21 | 79.06 |
| Zm00001d011333_P001 | Maize | cytosol, golgi, mitochondrion | 33.21 | 66.91 |
| Solyc02g092730.2.1 | Tomato | cytosol, nucleus | 60.0 | 66.14 |
| VIT_14s0219g00150.t01 | Wine grape | mitochondrion | 78.21 | 54.61 |
| Zm00001d045148_P001 | Maize | mitochondrion | 26.43 | 51.75 |
| AT5G65165.1 | Thale cress | mitochondrion | 56.43 | 51.13 |
| HORVU5Hr1G057270.1 | Barley | cytosol, mitochondrion, plastid | 16.07 | 48.91 |
| HORVU7Hr1G074890.6 | Barley | mitochondrion | 60.71 | 48.57 |
| Zm00001d035136_P001 | Maize | mitochondrion | 69.64 | 48.03 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 16.43 | 47.92 |
| Os08t0120000-05 | Rice | mitochondrion | 59.29 | 47.43 |
| Zm00001d049649_P001 | Maize | mitochondrion | 68.93 | 47.42 |
| OQU79812 | Sorghum | mitochondrion | 58.21 | 46.31 |
| TraesCS7A01G314000.1 | Wheat | mitochondrion | 60.36 | 46.17 |
| TraesCS7B01G214900.1 | Wheat | mitochondrion | 60.0 | 45.9 |
| TraesCS7D01G311200.1 | Wheat | mitochondrion | 60.0 | 45.9 |
| Os09t0370200-01 | Rice | mitochondrion | 13.21 | 13.03 |
Protein Annotations
| KEGG:00020+1.3.5.1 | KEGG:00190+1.3.5.1 | KEGG:00650+1.3.5.1 | KEGG:00720+1.3.5.1 | Gene3D:1.10.1060.10 | MapMan:2.3.6.1.2 |
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS |
| EntrezGene:834065 | ProteinID:AED94578.1 | EMBL:AJ278911 | ArrayExpress:AT5G40650 | EnsemblPlantsGene:AT5G40650 | RefSeq:AT5G40650 |
| TAIR:AT5G40650 | RefSeq:AT5G40650-TAIR-G | EnsemblPlants:AT5G40650.1 | TAIR:AT5G40650.1 | EMBL:AY074299 | EMBL:AY087504 |
| EMBL:AY123036 | Unigene:At.20145 | ProteinID:BAB08537.1 | InterPro:Beta-grasp_dom_sf | GO:GO:0000104 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005749 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006121 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008177 | GO:GO:0008270 | GO:GO:0009055 |
| GO:GO:0009060 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0022900 | GO:GO:0022904 |
| GO:GO:0045273 | GO:GO:0045281 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 | GO:GO:0051538 |
| GO:GO:0051539 | GO:GO:0055114 | InterPro:Helical_ferredxn | InterPro:IPR001041 | InterPro:IPR009051 | InterPro:IPR012675 |
| InterPro:IPR017896 | RefSeq:NP_198881.1 | PFAM:PF13085 | PFAM:PF13534 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00197 | ScanProsite:PS00198 |
| PFscan:PS51085 | PFscan:PS51379 | PANTHER:PTHR11921 | PANTHER:PTHR11921:SF29 | UniProt:Q8LB02 | Symbol:SDH2-2 |
| SUPFAM:SSF46548 | SUPFAM:SSF54292 | InterPro:Succ_DH/fum_Rdtase_Fe-S | InterPro:Succ_DH/fum_Rdtase_N | TIGRFAMs:TIGR00384 | UniParc:UPI00000A3414 |
Description
SDH2-2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB02]
Coordinates
chr5:+:16281394..16283527
Molecular Weight (calculated)
31142.6 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.417
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFGLIGRVV GTKSSRLSTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT FQIYRWNPDN PGKPELQDYK IDLKDCGPMV LDALIKIKNE MDPSLTFRRS
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANRWISDSR DEYTKERLEA IDDEFKLYRC HTILNCARAC PKGLNPGKQI THIKQLQKSG
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANRWISDSR DEYTKERLEA IDDEFKLYRC HTILNCARAC PKGLNPGKQI THIKQLQKSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.