Factsheet for AT5G65165.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031877.1-P	Field mustard	mitochondrion	87.7	88.56
CDY37805	Canola	mitochondrion	87.7	88.56
CDY06159	Canola	cytosol	37.86	87.31
CDY33981	Canola	mitochondrion	86.41	87.25
Solyc04g055020.1.1	Tomato	mitochondrion	67.96	67.96
PGSC0003DMT400053128	Potato	mitochondrion	55.34	66.28
VIT_00s0304g00040.t01	Wine grape	mitochondrion	58.58	63.96
Solyc04g055030.1.1	Tomato	mitochondrion	59.87	61.87
TraesCS5D01G201100.1	Wheat	mitochondrion	59.55	60.53
TraesCS5A01G189800.1	Wheat	mitochondrion	59.22	60.2
HORVU5Hr1G058190.1	Barley	mitochondrion	58.9	59.28
Zm00001d005663_P001	Maize	mitochondrion	57.93	58.31
TraesCS5B01G193400.1	Wheat	mitochondrion	57.28	57.1
Os09t0370300-01	Rice	mitochondrion	57.28	56.91
OQU89416	Sorghum	mitochondrion	56.96	56.77
AT5G40650.1	Thale cress	mitochondrion	51.13	56.43
PGSC0003DMT400086943	Potato	mitochondrion	54.37	56.19
AT3G27380.1	Thale cress	mitochondrion	50.16	55.56

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	Gene3D:1.10.1060.10	MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	EntrezGene:836640
UniProt:A0A178UG26	ProteinID:AED98011.1	EMBL:AJ278912	ProteinID:ANM70262.1	ArrayExpress:AT5G65165	EnsemblPlantsGene:AT5G65165
RefSeq:AT5G65165	TAIR:AT5G65165	RefSeq:AT5G65165-TAIR-G	EnsemblPlants:AT5G65165.1	TAIR:AT5G65165.1	ProteinID:BAB11652.1
InterPro:Beta-grasp_dom_sf	GO:GO:0000104	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091
GO:GO:0006099	GO:GO:0006121	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008177
GO:GO:0009055	GO:GO:0009060	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0022900
GO:GO:0022904	GO:GO:0045273	GO:GO:0045281	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537
GO:GO:0051538	GO:GO:0051539	GO:GO:0055114	InterPro:Helical_ferredxn	InterPro:IPR009051	InterPro:IPR012675
InterPro:IPR017896	RefSeq:NP_001331888.1	RefSeq:NP_680465.2	ProteinID:OAO92589.1	PFAM:PF13085	PFAM:PF13534
PO:PO:0001170	PO:PO:0007057	ScanProsite:PS00197	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR11921
PANTHER:PTHR11921:SF23	UniProt:Q9FJP9	Symbol:SDH2-3	SUPFAM:SSF46548	SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_Fe-S
InterPro:Succ_DH/fum_Rdtase_N	TIGRFAMs:TIGR00384	UniParc:UPI00000A6F65	:	:	:

Description

SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]

Coordinates

chr5:-:26034422..26036057

Molecular Weight (calculated)

34985.1 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.591

Length

309 amino acids

Sequence
(BLAST)

001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDSRD EYREERLQAI TESETKVYRC RAIKNCTATC PKGLNPASAI LKMKSKHLLS
301: DPLVRTESV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.