Factsheet for HORVU5Hr1G058190.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G201100.1	Wheat	mitochondrion	96.09	97.04
TraesCS5A01G189800.1	Wheat	mitochondrion	95.77	96.71
TraesCS5B01G193400.1	Wheat	mitochondrion	89.9	89.03
Zm00001d005663_P001	Maize	mitochondrion	73.62	73.62
OQU89416	Sorghum	mitochondrion	74.27	73.55
Os09t0370300-01	Rice	mitochondrion	71.99	71.06
HORVU5Hr1G057270.1	Barley	cytosol, mitochondrion, plastid	21.17	70.65
PGSC0003DMT400053128	Potato	mitochondrion	50.81	60.47
CDY06159	Canola	cytosol	26.38	60.45
VIT_00s0304g00040.t01	Wine grape	mitochondrion	55.05	59.72
Solyc04g055020.1.1	Tomato	mitochondrion	59.93	59.55
CDY37805	Canola	mitochondrion	58.96	59.15
Bra031877.1-P	Field mustard	mitochondrion	58.96	59.15
AT5G65165.1	Thale cress	mitochondrion	59.28	58.9
CDY33981	Canola	mitochondrion	58.63	58.82
Solyc04g055030.1.1	Tomato	mitochondrion	54.72	56.19
PGSC0003DMT400086943	Potato	mitochondrion	50.81	52.17
HORVU7Hr1G074890.6	Barley	mitochondrion	44.63	39.14

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	Gene3D:1.10.1060.10	MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A287RD67
InterPro:Beta-grasp_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0022900
GO:GO:0045273	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G058190	EnsemblPlants:HORVU5Hr1G058190.1
InterPro:Helical_ferredxn	InterPro:IPR009051	InterPro:IPR012675	InterPro:IPR017896	PFAM:PF13085	PFAM:PF13534
ScanProsite:PS00197	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR11921	PANTHER:PTHR11921:SF23	SUPFAM:SSF46548
SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_Fe-S	InterPro:Succ_DH/fum_Rdtase_N	TIGRFAMs:TIGR00384	UniParc:UPI000B486F14	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:455134849..455136230

Molecular Weight (calculated)

34346.2 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.448

Length

307 amino acids

Sequence
(BLAST)

001: RLAMLRRTLP RLASVKDRMA GAAKNAVKGD EHFPALKGHP AARVHAREAA EKQAGLAAAE EEKKRSGKPT TVKEFQIYRW NPDAHGRPFL QSYFVDLGTC
101: GPMVLDVLQK IKSEHDSTLA FRRSCREGIC GSCSMNIDGV NTVACLKSID TDTSTATMIT PLPHMYVVKD LVVDLTNFYQ QYKSIEPWLK TKRGAPEGRE
201: HAQSPAERRK LDGLYECILC ACCSTACPSY WWNSEDFLGP AALLHAYRWV SDSRDDYGEE RIQALSEGWD KLYRCRMIKS CTATCPKSLD PATAISALKT
301: MHQLRKA

Best Arabidopsis Sequence Match ( AT5G65165.1 )
(BLAST)

001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDSRD EYREERLQAI TESETKVYRC RAIKNCTATC PKGLNPASAI LKMKSKHLLS
301: DPLVRTESV

Arabidopsis Description

SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.