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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 6
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g055030.1.1 Tomato mitochondrion 77.26 77.26
CDY06159 Canola cytosol 31.1 69.4
PGSC0003DMT400064279 Potato cytosol 25.42 67.26
PGSC0003DMT400053128 Potato mitochondrion 54.18 62.79
Bra031877.1-P Field mustard mitochondrion 57.19 55.88
CDY37805 Canola mitochondrion 57.19 55.88
CDY33981 Canola mitochondrion 56.52 55.23
VIT_00s0304g00040.t01 Wine grape mitochondrion 52.17 55.12
AT5G65165.1 Thale cress mitochondrion 56.19 54.37
TraesCS5D01G201100.1 Wheat mitochondrion 52.84 51.97
TraesCS5A01G189800.1 Wheat mitochondrion 52.17 51.32
HORVU5Hr1G058190.1 Barley mitochondrion 52.17 50.81
Os09t0370300-01 Rice mitochondrion 50.84 48.87
TraesCS5B01G193400.1 Wheat mitochondrion 50.5 48.71
Zm00001d005663_P001 Maize mitochondrion 49.5 48.21
PGSC0003DMT400032862 Potato mitochondrion 44.15 48.18
OQU89416 Sorghum mitochondrion 48.83 47.1
Protein Annotations
KEGG:00020+1.3.5.1KEGG:00190+1.3.5.1KEGG:00650+1.3.5.1KEGG:00720+1.3.5.1Gene3D:1.10.1060.10MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BSGene3D:3.10.20.30InterPro:4Fe4S_Fe-S-bdInterPro:4Fe4S_Fe_S_CS
InterPro:Beta-grasp_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006091GO:GO:0006099
GO:GO:0008150GO:GO:0008152GO:GO:0008177GO:GO:0009055GO:GO:0009987GO:GO:0016020
GO:GO:0016491GO:GO:0022900GO:GO:0046872GO:GO:0051536GO:GO:0051537GO:GO:0051538
GO:GO:0051539GO:GO:0055114InterPro:Helical_ferredxnInterPro:IPR001041InterPro:IPR009051InterPro:IPR012675
InterPro:IPR017896UniProt:M1DCU3PFAM:PF13085PFAM:PF13534EnsemblPlantsGene:PGSC0003DMG400036514PGSC:PGSC0003DMG400036514
EnsemblPlants:PGSC0003DMT400086943ScanProsite:PS00197ScanProsite:PS00198PFscan:PS51085PFscan:PS51379PANTHER:PTHR11921
PANTHER:PTHR11921:SF23SUPFAM:SSF46548SUPFAM:SSF54292InterPro:Succ_DH/fum_Rdtase_Fe-SInterPro:Succ_DH/fum_Rdtase_NTIGRFAMs:TIGR00384
UniParc:UPI00029528EBSEG:seg::::
Description
Succinate dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400036514]
Coordinates
chr4:+:51312404..51316311
Molecular Weight (calculated)
33688.6 Da
IEP (calculated)
8.906
GRAVY (calculated)
-0.476
Length
299 amino acids
Sequence
(BLAST)
001: MSRNLIKEGM KKVVGRWRKK EYSRFPILEG HPIAKQHGEQ VVKSVGNLKR GYYTVGGLPS AHKVLTQRAE AVAEVVAAAG YPGVLDALQK IKGEVDSSLT
101: YRRSCREGIC GSCAMNINGV NTVACLKPID TDTSRPMTIT PLPHLFVIKD LVVDLSDFYQ QYKSIEPWLK TRNPPPDGKE YRQTPEERKK LDGLYECILC
201: ACCSASCPSY WWNPEEFLGP AALINTYRWI SDSRDDFADE RLQAITEDER RLYRCRAIGN CTACCPKSLR PSEAIRKMKT KHLTGIPVET LSNNMKTSH
Best Arabidopsis Sequence Match ( AT5G65165.1 )
(BLAST)
001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDSRD EYREERLQAI TESETKVYRC RAIKNCTATC PKGLNPASAI LKMKSKHLLS
301: DPLVRTESV
Arabidopsis Description
SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.