Factsheet for Zm00001d005663_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89416	Sorghum	mitochondrion	84.69	83.87
TraesCS5D01G201100.1	Wheat	mitochondrion	73.29	74.01
HORVU5Hr1G058190.1	Barley	mitochondrion	73.62	73.62
TraesCS5A01G189800.1	Wheat	mitochondrion	72.64	73.36
Os09t0370300-01	Rice	mitochondrion	72.96	72.03
TraesCS5B01G193400.1	Wheat	mitochondrion	69.06	68.39
CDY06159	Canola	cytosol	28.01	64.18
CDY33981	Canola	mitochondrion	58.96	59.15
Bra031877.1-P	Field mustard	mitochondrion	57.98	58.17
CDY37805	Canola	mitochondrion	57.98	58.17
AT5G65165.1	Thale cress	mitochondrion	58.31	57.93
VIT_00s0304g00040.t01	Wine grape	mitochondrion	52.44	56.89
Solyc04g055020.1.1	Tomato	mitochondrion	57.0	56.63
PGSC0003DMT400053128	Potato	mitochondrion	47.56	56.59
Solyc04g055030.1.1	Tomato	mitochondrion	51.79	53.18
Zm00001d011333_P001	Maize	cytosol, golgi, mitochondrion	23.78	52.52
PGSC0003DMT400086943	Potato	mitochondrion	48.21	49.5
Zm00001d045148_P001	Maize	mitochondrion	19.54	41.96
Zm00001d035136_P001	Maize	mitochondrion	47.88	36.21
Zm00001d049649_P001	Maize	mitochondrion	47.88	36.12

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	Gene3D:1.10.1060.10	MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS
UniProt:A0A1D6EPD2	InterPro:Beta-grasp_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006099
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491
GO:GO:0022900	GO:GO:0045273	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:Helical_ferredxn
InterPro:IPR001041	InterPro:IPR009051	InterPro:IPR012675	InterPro:IPR017896	ProteinID:ONM21631.1	PFAM:PF13085
PFAM:PF13534	ScanProsite:PS00197	ScanProsite:PS00198	PFscan:PS51379	PANTHER:PTHR11921	PANTHER:PTHR11921:SF23
SUPFAM:SSF46548	SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_Fe-S	InterPro:Succ_DH/fum_Rdtase_N	TIGRFAMs:TIGR00384	UniParc:UPI0008436B73
EnsemblPlantsGene:Zm00001d005663	EnsemblPlants:Zm00001d005663_P001	EnsemblPlants:Zm00001d005663_T001	SEG:seg	:	:

Description

Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 mitochondrial

Coordinates

chr2:-:182688634..182689557

Molecular Weight (calculated)

33837.5 Da

IEP (calculated)

9.054

GRAVY (calculated)

-0.443

Length

307 amino acids

Sequence
(BLAST)

001: MLRRTLPALR SAKDGVAGAA RQAGGKGDTH FPSLRGHPAA RANAREAAEG QARLSAAEEE RGRGGRPPTT VKEFQVYRWN PDSPAGRPFL QSYLVDLASC
101: GPMVLDVLQK IKAEQDPTLA FRRSCREGIC GSCAMSVDGV NTVACLKPVD ADASRPSMVT PLPHMYVVKD LVVDLTAFYQ QYKSVEPWLK TRGPPPKDRE
201: HPQSPAQRKR LDGLYECILC ACCSTACPSY WWNSEAFLGP AALLHAYRWV SDSRDHYGEQ RVQSLSEGWD KMYRCRMIKS CTATCPKSLD PAAAISAMKA
301: LHQLRKA

Best Arabidopsis Sequence Match ( AT5G65165.1 )
(BLAST)

001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDSRD EYREERLQAI TESETKVYRC RAIKNCTATC PKGLNPASAI LKMKSKHLLS
301: DPLVRTESV

Arabidopsis Description

SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.