Factsheet for Zm00001d011333_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064279	Potato	cytosol	44.6	54.87
Bra028469.1-P	Field mustard	cytosol	66.91	46.27
CDX67470	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.9	40.45
Bra039082.1-P	Field mustard	mitochondrion	63.31	39.11
Solyc02g092730.2.1	Tomato	cytosol, nucleus	71.22	38.98
Solyc02g093680.2.1	Tomato	extracellular, mitochondrion, plastid	69.78	35.4
PGSC0003DMT400032862	Potato	mitochondrion	69.78	35.4
AT5G40650.1	Thale cress	mitochondrion	66.91	33.21
AT3G27380.1	Thale cress	mitochondrion	66.19	32.97
Bra025272.1-P	Field mustard	mitochondrion	66.19	32.74
Bra033006.1-P	Field mustard	mitochondrion	66.19	32.74
Zm00001d049649_P001	Maize	mitochondrion	82.01	28.01
Zm00001d035136_P001	Maize	mitochondrion	77.7	26.6
VIT_14s0219g00150.t01	Wine grape	mitochondrion	69.78	24.19
Zm00001d005663_P001	Maize	mitochondrion	52.52	23.78
KRH33590	Soybean	cytosol	26.62	21.51
Zm00001d045148_P001	Maize	mitochondrion	19.42	18.88
GSMUA_Achr7P02810_001	Banana	extracellular, vacuole	11.51	10.53
CDY11704	Canola	cytosol	2.88	6.15
CDX67469	Canola	mitochondrion	3.6	4.39

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	Gene3D:1.10.1060.10	MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sf	Gene3D:3.10.20.30	InterPro:4Fe4S_Fe-S-bd	UniProt:A0A1D6FZ06	ProteinID:AQK96556.1	InterPro:Beta-grasp_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0022900	GO:GO:0051536
GO:GO:0055114	InterPro:Helical_ferredxn	InterPro:IPR009051	InterPro:IPR012675	InterPro:IPR017896	PFAM:PF13085
PFscan:PS51379	PANTHER:PTHR11921	PANTHER:PTHR11921:SF29	SUPFAM:SSF46548	SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_Fe-S
InterPro:Succ_DH/fum_Rdtase_N	TIGRFAMs:TIGR00384	UniParc:UPI00084474D3	EnsemblPlantsGene:Zm00001d011333	EnsemblPlants:Zm00001d011333_P001	EnsemblPlants:Zm00001d011333_T001

Description

Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2 mitochondrial

Coordinates

chr8:-:147150138..147150711

Molecular Weight (calculated)

15579.0 Da

IEP (calculated)

5.681

GRAVY (calculated)

0.052

Length

139 amino acids

Sequence
(BLAST)

001: MNIYGDNGLA CLTKISGASS ASTVSPLPHM FVVKDLVVDM TNFYSQYKSV EPWLKRKDQP LQQGKEIPQT KADRAKLDGM YECILCACCS TSCSSYWWNP
101: EEYLGPIALL HANRCDVPML YILLAVTLMT SGIMTEWLL

Best Arabidopsis Sequence Match ( AT3G27380.1 )
(BLAST)

001: MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD NPGKPELQNY QIDLKDCGPM VLDALIKIKN EMDPSLTFRR
101: SCREGICGSC AMNIDGCNGL ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC
201: STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR

Arabidopsis Description

SDH2-1Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.