Factsheet for GSMUA_Achr7P02810_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67470	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	30.92	52.81
GSMUA_Achr11P...	Banana	cytosol, extracellular	23.68	37.5
GSMUA_Achr11P...	Banana	cytosol	40.79	30.85
GSMUA_Achr11P...	Banana	mitochondrion	41.45	22.26
Solyc02g092730.2.1	Tomato	cytosol, nucleus	34.21	20.47
Solyc02g093680.2.1	Tomato	extracellular, mitochondrion, plastid	36.18	20.07
PGSC0003DMT400032862	Potato	mitochondrion	35.53	19.71
Zm00001d035136_P001	Maize	mitochondrion	41.45	15.52
Zm00001d049649_P001	Maize	mitochondrion	41.45	15.48
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	8.55	13.54
VIT_14s0219g00150.t01	Wine grape	mitochondrion	35.53	13.47
Zm00001d011333_P001	Maize	cytosol, golgi, mitochondrion	10.53	11.51
PGSC0003DMT400064279	Potato	cytosol	7.24	9.73
CDY11704	Canola	cytosol	3.95	9.23
GSMUA_Achr7P02800_001	Banana	mitochondrion	12.5	9.22
Os08t0120000-05	Rice	mitochondrion	19.08	8.29
HORVU7Hr1G074890.6	Barley	mitochondrion	19.08	8.29
KRH33590	Soybean	cytosol	9.21	8.14
OQU79812	Sorghum	mitochondrion	18.42	7.95
TraesCS7A01G314000.1	Wheat	mitochondrion	19.08	7.92
TraesCS7B01G214900.1	Wheat	mitochondrion	19.08	7.92
TraesCS7D01G311200.1	Wheat	mitochondrion	19.08	7.92
CDX67469	Canola	mitochondrion	4.61	6.14
Zm00001d045148_P001	Maize	mitochondrion	5.26	5.59
Os09t0370200-01	Rice	mitochondrion	8.55	4.58

Protein Annotations

EnsemblPlants:GSMUA_Achr7P02810_001	EnsemblPlants:GSMUA_Achr7T02810_001	EnsemblPlantsGene:GSMUA_Achr7G02810_001	Gene3D:1.10.1060.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0051536	InterPro:Helical_ferredxn	InterPro:IPR009051
PANTHER:PTHR11921	PANTHER:PTHR11921:SF29	SUPFAM:SSF46548	TMHMM:TMhelix	UniParc:UPI0002955FAC	UniProt:M0TE71
MapMan:35.1	:	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G02810_001]

Coordinates

chr7:+:2257159..2260935

Molecular Weight (calculated)

18046.0 Da

IEP (calculated)

9.387

GRAVY (calculated)

-0.138

Length

152 amino acids

Sequence
(BLAST)

001: MVFYSKEIFF ICMRLLQWSF FLSSLYAGIC KKYSEKREEN TYNLMQSCSN YVFLMFVSSV FFYHFISILV QSLNSSKCLF KSLTLYADMA GVRKAFRWIQ
101: DSRDQYTKER LEAINDEFKL YRCHNIQNCV HACPKGLNPA KQINSLKKPQ LQ

Best Arabidopsis Sequence Match ( AT5G40650.1 )
(BLAST)

001: MAFGLIGRVV GTKSSRLSTA ARLIPARWTS TGSEAQSKAS TGGGGASLKT FQIYRWNPDN PGKPELQDYK IDLKDCGPMV LDALIKIKNE MDPSLTFRRS
101: CREGICGSCA MNIDGCNGLA CLTKIESGSK ETTITPLPHM FVIKDLVVDM TNFYNQYKSI EPWLKRKNPA SVPGKEILQS KKDRAKLDGM YECILCACCS
201: TSCPSYWWNP ESYLGPAALL HANRWISDSR DEYTKERLEA IDDEFKLYRC HTILNCARAC PKGLNPGKQI THIKQLQKSG

Arabidopsis Description

SDH2-2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.