CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045148_P001	Maize	mitochondrion	53.51	42.66
CDY11704	Canola	cytosol	22.81	40.0
HORVU5Hr1G057270.1	Barley	cytosol, mitochondrion, plastid	30.7	38.04
PGSC0003DMT400064279	Potato	cytosol	31.58	31.86
KRH33590	Soybean	cytosol	44.74	29.65
GSMUA_Achr7P02800_001	Banana	mitochondrion	51.75	28.64
CDY34152	Canola	mitochondrion	70.18	28.47
CDX83688	Canola	mitochondrion	69.3	28.32
CDY13709	Canola	mitochondrion	68.42	27.76
PGSC0003DMT400032862	Potato	mitochondrion	59.65	24.82
Solyc02g093680.2.1	Tomato	extracellular, mitochondrion, plastid	58.77	24.45
GSMUA_Achr11P...	Banana	mitochondrion	54.39	21.91
OQU79812	Sorghum	mitochondrion	57.89	18.75
Os08t0120000-05	Rice	mitochondrion	57.02	18.57
HORVU7Hr1G074890.6	Barley	mitochondrion	57.02	18.57
CDY20051	Canola	cytosol	32.46	18.5
CDY48359	Canola	cytosol	32.46	18.5
CDY00158	Canola	cytosol	32.46	18.23
VIT_14s0219g00150.t01	Wine grape	mitochondrion	63.16	17.96
GSMUA_Achr11P...	Banana	cytosol	31.58	17.91
TraesCS7D01G311200.1	Wheat	mitochondrion	57.02	17.76
TraesCS7B01G214900.1	Wheat	mitochondrion	57.02	17.76
TraesCS7A01G314000.1	Wheat	mitochondrion	57.02	17.76
Zm00001d049649_P001	Maize	mitochondrion	57.89	16.22
Zm00001d035136_P001	Maize	mitochondrion	57.02	16.01
CDY37805	Canola	mitochondrion	41.23	15.36
CDY33981	Canola	mitochondrion	41.23	15.36
Solyc02g092730.2.1	Tomato	cytosol, nucleus	30.7	13.78
GSMUA_Achr7P02810_001	Banana	extracellular, vacuole	6.14	4.61
Os09t0370200-01	Rice	mitochondrion	11.4	4.58
Zm00001d011333_P001	Maize	cytosol, golgi, mitochondrion	4.39	3.6
GSMUA_Achr11P...	Banana	cytosol, extracellular	0.0	0.0
CDY06159	Canola	cytosol	0.0	0.0
CDX67470	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0
CDY11705	Canola	plastid	0.0	0.0

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type
InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	MapMan:35.1	GO:A0A078BUV4	InterPro:Beta-grasp_dom_sf	EnsemblPlants:CDX67469
ProteinID:CDX67469	ProteinID:CDX67469.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0009055
GO:GO:0051536	GO:GO:0051537	EnsemblPlantsGene:GSBRNA2T00098573001	InterPro:IPR001041	InterPro:IPR012675	PFAM:PF13085
ScanProsite:PS00197	PANTHER:PTHR11921	MetaCyc:PWY-3781	MetaCyc:PWY-4302	MetaCyc:PWY-561	MetaCyc:PWY-5690
MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7254	MetaCyc:PWY-7279	SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_N
UniParc:UPI0004EE03AF	:	:	:	:	:

Description

BnaA07g15090D

Coordinates

chrLK031787:+:425530..425978

Molecular Weight (calculated)

12577.2 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.287

Length

114 amino acids

Sequence
(BLAST)

001: MASGLVGRVV GTNPSRAARL IPSRWTSSKA VVGAKLKTFQ IYRWNADSPG KPELQDYQLD LKDCGPMVLD ALIKITNEMD PSLTFRRSCR EGMCGSCAMN
101: IDGCNDRVGV FEKY

Best Arabidopsis Sequence Match ( AT3G27380.1 )
(BLAST)

001: MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD NPGKPELQNY QIDLKDCGPM VLDALIKIKN EMDPSLTFRR
101: SCREGICGSC AMNIDGCNGL ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC
201: STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR

Arabidopsis Description

SDH2-1Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.