Factsheet for Os09t0370200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064279	Potato	cytosol	6.34	15.93
Bra028469.1-P	Field mustard	cytosol	9.86	13.93
CDY11704	Canola	cytosol	3.17	13.85
Bra039082.1-P	Field mustard	mitochondrion	10.92	13.78
AT5G40650.1	Thale cress	mitochondrion	13.03	13.21
PGSC0003DMT400032862	Potato	mitochondrion	12.68	13.14
Solyc02g093680.2.1	Tomato	extracellular, mitochondrion, plastid	12.68	13.14
AT3G27380.1	Thale cress	mitochondrion	12.68	12.9
Os09t0370300-01	Rice	mitochondrion	14.08	12.86
Bra033006.1-P	Field mustard	mitochondrion	12.32	12.46
Bra025272.1-P	Field mustard	mitochondrion	12.32	12.46
CDX67469	Canola	mitochondrion	4.58	11.4
Os08t0120000-05	Rice	mitochondrion	13.38	10.86
Solyc02g092730.2.1	Tomato	cytosol, nucleus	9.15	10.24
CDX67470	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	3.17	10.11
KRH33590	Soybean	cytosol	5.99	9.88
VIT_14s0219g00150.t01	Wine grape	mitochondrion	13.73	9.73
GSMUA_Achr7P02810_001	Banana	extracellular, vacuole	4.58	8.55

Protein Annotations

MapMan:2.4.5.2.9	Gene3D:3.40.30.10	EntrezGene:4346889	EMBL:AK064804	ProteinID:BAD26385.1	ProteinID:BAF24931.1
ProteinID:BAT07765.1	ProteinID:EAZ44498.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006825	GO:GO:0006878	GO:GO:0008150	GO:GO:0008535	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0019725	GO:GO:0045454	GO:GO:0046872	GO:GO:0055070
EnsemblPlantsGene:Os09g0370200	EnsemblPlants:Os09t0370200-01	PFAM:PF02630	PANTHER:PTHR12151	PANTHER:PTHR12151:SF1	UniProt:Q6H4G4
InterPro:SCO1/SenC	SUPFAM:SSF52833	SignalP:SignalP-noTM	InterPro:Thioredoxin-like_sf	UniParc:UPI00003B46CF	RefSeq:XP_015610724.1
SEG:seg	:	:	:	:	:

Description

Copper chaperone SCO1/SenC domain containing protein. (Os09t0370200-01)

Coordinates

chr9:-:12290004..12294955

Molecular Weight (calculated)

31801.9 Da

IEP (calculated)

8.644

GRAVY (calculated)

-0.408

Length

284 amino acids

Sequence
(BLAST)

001: MLTPRVLKLS LLRRLGAASA ARAAERPPPC RPRVFPARSN HSRGYSSEGG SKYNRPMRQF AEENEANPQP LIYYVVPSAL LVFAGLVTFV HYNDEKRAVT
101: QEAQQTSVPK RCTTNRPAIG GPFKLYDTEN KEVTESKLRG NWTLMYFGYT SCPDIGPAEV QKMADVVKLL ESKYGTKITP LFITIDPQRD SPAQLKAYLS
201: EFDPRIIGLT GSINAVRQIA QEYRVFFKKV DDIGQDYLVE SSHNMYLLDP CLETARCFGA EYEASDLAEA ITLEIQKASK SSTN

Best Arabidopsis Sequence Match ( AT4G39740.1 )
(BLAST)

001: MLPCRRLVLS CKNQAASFLR RCGPSKRIQS VNYCKSTRQG HEIPDVKPLF PTGGGTQAPS RSRARYAVPA ILLGFAGFVG FLHYNDERRA VPRGQASSNS
101: GCGCGSNTTV KGPIIGGPFT LVSTENKIVT ENDFCGKWVL LYFGYSFSPD VGPEQLKMMS KAVDKLESKH NEKILPVFVT LDPQRDTPSH LHAYLKEFDS
201: RILGLTGTAS AMRQMAQEYR VYFKKVQEDG EDYLVDTSHN MYLINPKMEI VRCFGVEYNP DELSQELLKE VASVSQ

Arabidopsis Description

HCC2HCC2 [Source:UniProtKB/TrEMBL;Acc:A0A178V000]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.