Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028469.1-P | Field mustard | cytosol | 68.46 | 95.02 |
| AT5G40650.1 | Thale cress | mitochondrion | 91.76 | 91.43 |
| PGSC0003DMT400064279 | Potato | cytosol | 36.56 | 90.27 |
| KRH07075 | Soybean | cytosol | 69.53 | 82.91 |
| Solyc02g093680.2.1 | Tomato | extracellular, mitochondrion, plastid | 77.42 | 78.83 |
| PGSC0003DMT400032862 | Potato | mitochondrion | 77.42 | 78.83 |
| KRG94380 | Soybean | mitochondrion | 77.06 | 77.62 |
| Zm00001d011333_P001 | Maize | cytosol, golgi, mitochondrion | 32.97 | 66.19 |
| Solyc02g092730.2.1 | Tomato | cytosol, nucleus | 60.22 | 66.14 |
| VIT_14s0219g00150.t01 | Wine grape | mitochondrion | 78.49 | 54.61 |
| Zm00001d045148_P001 | Maize | mitochondrion | 27.24 | 53.15 |
| AT5G65165.1 | Thale cress | mitochondrion | 55.56 | 50.16 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 16.49 | 47.92 |
| HORVU5Hr1G057270.1 | Barley | cytosol, mitochondrion, plastid | 15.77 | 47.83 |
| HORVU7Hr1G074890.6 | Barley | mitochondrion | 59.86 | 47.71 |
| Zm00001d035136_P001 | Maize | mitochondrion | 69.18 | 47.54 |
| Zm00001d049649_P001 | Maize | mitochondrion | 69.18 | 47.42 |
| Os08t0120000-05 | Rice | mitochondrion | 58.42 | 46.57 |
| OQU79812 | Sorghum | mitochondrion | 58.06 | 46.02 |
| TraesCS7A01G314000.1 | Wheat | mitochondrion | 59.5 | 45.36 |
| TraesCS7B01G214900.1 | Wheat | mitochondrion | 59.14 | 45.08 |
| TraesCS7D01G311200.1 | Wheat | mitochondrion | 59.14 | 45.08 |
| Os09t0370200-01 | Rice | mitochondrion | 12.9 | 12.68 |
Protein Annotations
| KEGG:00020+1.3.5.1 | KEGG:00190+1.3.5.1 | KEGG:00650+1.3.5.1 | KEGG:00720+1.3.5.1 | Gene3D:1.10.1060.10 | MapMan:2.3.6.1.2 |
| InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.10.20.30 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS |
| EntrezGene:822359 | UniProt:A0A178VCX3 | ProteinID:AEE77309.1 | ProteinID:AEE77310.1 | EMBL:AJ278910 | ArrayExpress:AT3G27380 |
| EnsemblPlantsGene:AT3G27380 | RefSeq:AT3G27380 | TAIR:AT3G27380 | RefSeq:AT3G27380-TAIR-G | EnsemblPlants:AT3G27380.1 | TAIR:AT3G27380.1 |
| EMBL:AY035013 | EMBL:AY063053 | EMBL:AY086901 | EMBL:AY924777 | Unigene:At.71559 | ProteinID:BAA95713.1 |
| InterPro:Beta-grasp_dom_sf | GO:GO:0000104 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006091 |
| GO:GO:0006099 | GO:GO:0006121 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008177 |
| GO:GO:0008270 | GO:GO:0009055 | GO:GO:0009060 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0022900 | GO:GO:0022904 | GO:GO:0045273 | GO:GO:0045281 | GO:GO:0046872 | GO:GO:0051536 |
| GO:GO:0051537 | GO:GO:0051538 | GO:GO:0051539 | GO:GO:0055114 | InterPro:Helical_ferredxn | InterPro:IPR001041 |
| InterPro:IPR009051 | InterPro:IPR012675 | InterPro:IPR017896 | RefSeq:NP_001118718.1 | RefSeq:NP_189374.1 | ProteinID:OAP03205.1 |
| PFAM:PF13085 | PFAM:PF13534 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00197 | ScanProsite:PS00198 | PFscan:PS51085 |
| PFscan:PS51379 | PANTHER:PTHR11921 | PANTHER:PTHR11921:SF29 | UniProt:Q8LBZ7 | Symbol:SDH2-1 | SUPFAM:SSF46548 |
| SUPFAM:SSF54292 | InterPro:Succ_DH/fum_Rdtase_Fe-S | InterPro:Succ_DH/fum_Rdtase_N | TIGRFAMs:TIGR00384 | UniParc:UPI00000A9ED9 | : |
Description
SDH2-1Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]
Coordinates
chr3:-:10129610..10132882
Molecular Weight (calculated)
31172.6 Da
IEP (calculated)
8.528
GRAVY (calculated)
-0.429
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGLIGRLV GTKPSKLATA ARLIPARWTS TGAEAETKAS SGGGRGSNLK TFQIYRWNPD NPGKPELQNY QIDLKDCGPM VLDALIKIKN EMDPSLTFRR
101: SCREGICGSC AMNIDGCNGL ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC
201: STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR
101: SCREGICGSC AMNIDGCNGL ACLTKIQDEA SETTITPLPH MFVIKDLVVD MTNFYNQYKS IEPWLKRKTP ASVPAKEILQ SKKDRAKLDG MYECILCACC
201: STSCPSYWWN PESYLGPAAL LHANRWISDS RDEYTKERLE AIDDEFKLYR CHTILNCARA CPKGLNPGKQ ITHIKQLQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.