Factsheet for HORVU5Hr1G057270.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11704	Canola	cytosol	21.74	30.77
CDX67469	Canola	mitochondrion	38.04	30.7
PGSC0003DMT400064279	Potato	cytosol	32.61	26.55
KRH33590	Soybean	cytosol	41.3	22.09
HORVU5Hr1G058190.1	Barley	mitochondrion	70.65	21.17
GSMUA_Achr7P02800_001	Banana	mitochondrion	46.74	20.87
Bra039082.1-P	Field mustard	mitochondrion	47.83	19.56
GSMUA_Achr11P...	Banana	cytosol	36.96	16.92
GSMUA_Achr11P...	Banana	mitochondrion	51.09	16.61
AT5G40650.1	Thale cress	mitochondrion	48.91	16.07
Bra028469.1-P	Field mustard	cytosol	34.78	15.92
AT3G27380.1	Thale cress	mitochondrion	47.83	15.77
Solyc02g093680.2.1	Tomato	extracellular, mitochondrion, plastid	45.65	15.33
PGSC0003DMT400032862	Potato	mitochondrion	45.65	15.33
Bra033006.1-P	Field mustard	mitochondrion	46.74	15.3
Bra025272.1-P	Field mustard	mitochondrion	46.74	15.3
HORVU7Hr1G074890.6	Barley	mitochondrion	44.57	11.71
Solyc02g092730.2.1	Tomato	cytosol, nucleus	31.52	11.42
VIT_14s0219g00150.t01	Wine grape	mitochondrion	47.83	10.97
GSMUA_Achr11P...	Banana	cytosol, extracellular	0.0	0.0
CDX67470	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	InterPro:2Fe-2S_ferredoxin-like_sf	Gene3D:3.10.20.30
MapMan:35.1	UniProt:A0A287RCB1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900
GO:GO:0051536	EnsemblPlantsGene:HORVU5Hr1G057270	EnsemblPlants:HORVU5Hr1G057270.1	InterPro:IPR012675	PFAM:PF13085	PANTHER:PTHR11921
PANTHER:PTHR11921:SF23	SUPFAM:SSF54292	InterPro:Succ_DH/fum_Rdtase_N	UniParc:UPI000B478F35	:	:

Description

No Description!

Coordinates

chrchr5H:+:449736962..449737753

Molecular Weight (calculated)

10425.6 Da

IEP (calculated)

7.956

GRAVY (calculated)

-0.125

Length

92 amino acids

Sequence
(BLAST)

1: MTVKELQIYR WNPDVHGRPF LQSYFINLGM CGPIVLDVLQ KIKSEHDSTL VFRRSCQEGI CRSYSMNIDG VNTTACLKHI DTNTSAATMI TT

Best Arabidopsis Sequence Match ( AT5G65165.2 )
(BLAST)

001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDR

Arabidopsis Description

SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.