Factsheet for Os09t0370300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005663_P001	Maize	mitochondrion	72.03	72.96
TraesCS5A01G189800.1	Wheat	mitochondrion	71.06	72.7
TraesCS5D01G201100.1	Wheat	mitochondrion	70.74	72.37
HORVU5Hr1G058190.1	Barley	mitochondrion	71.06	71.99
OQU89416	Sorghum	mitochondrion	71.7	71.94
TraesCS5B01G193400.1	Wheat	mitochondrion	66.88	67.1
CDY06159	Canola	cytosol	26.05	60.45
VIT_00s0304g00040.t01	Wine grape	mitochondrion	53.38	58.66
Solyc04g055020.1.1	Tomato	mitochondrion	57.23	57.61
AT5G65165.1	Thale cress	mitochondrion	56.91	57.28
Bra031877.1-P	Field mustard	mitochondrion	56.27	57.19
CDY37805	Canola	mitochondrion	56.27	57.19
CDY33981	Canola	mitochondrion	56.27	57.19
PGSC0003DMT400053128	Potato	mitochondrion	46.3	55.81
Solyc04g055030.1.1	Tomato	mitochondrion	52.09	54.18
PGSC0003DMT400086943	Potato	mitochondrion	48.87	50.84
Os08t0120000-05	Rice	mitochondrion	41.48	36.86
Os09t0370200-01	Rice	mitochondrion	12.86	14.08

Protein Annotations

KEGG:00020+1.3.5.1	KEGG:00190+1.3.5.1	KEGG:00650+1.3.5.1	KEGG:00720+1.3.5.1	Gene3D:1.10.1060.10	MapMan:2.3.6.1.2
InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe2S_fd_BS	Gene3D:3.10.20.30	EntrezGene:4346890	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS
ProteinID:BAD26386.1	ProteinID:BAF24932.1	ProteinID:BAT07766.1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674	GO:GO:0003735
GO:GO:0003824	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005840	GO:GO:0006091	GO:GO:0006099
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0008177	GO:GO:0009055	GO:GO:0009058
GO:GO:0009060	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0019538	GO:GO:0022900
GO:GO:0022904	GO:GO:0045273	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0051538
GO:GO:0051539	GO:GO:0055114	InterPro:Helical_ferredxn	InterPro:IPR009051	InterPro:IPR012675	InterPro:IPR017896
EnsemblPlantsGene:Os09g0370300	EnsemblPlants:Os09t0370300-01	PFAM:PF13085	PFAM:PF13534	ScanProsite:PS00197	ScanProsite:PS00198
PFscan:PS51379	PANTHER:PTHR11921	PANTHER:PTHR11921:SF23	UniProt:Q6H4G3	SUPFAM:SSF46548	SUPFAM:SSF54292
InterPro:Succ_DH/fum_Rdtase_Fe-S	InterPro:Succ_DH/fum_Rdtase_N	TIGRFAMs:TIGR00384	UniParc:UPI00003B46D0	RefSeq:XP_015611366.1	SEG:seg

Description

SUCCINATE DEHYDROGENASE SUBUNIT 2-2Similar to Iron sulfur subunit of succinate dehydrogenase (Truncated) and ribosomal protein S14 precursor. (Os09t0370300-01)

Coordinates

chr9:-:12295674..12296730

Molecular Weight (calculated)

34357.9 Da

IEP (calculated)

8.429

GRAVY (calculated)

-0.398

Length

311 amino acids

Sequence
(BLAST)

001: MILRRTLPRL ASAKDGSGGG FADGHFPSLR GHPAARANAR DAAEKQAALA AKEEEIRDHR RGDAAAASPA PSTVKEFRVY RWSPDAPSRR PHLQSYHVDL
101: ATCGPMVLDV LQKIKAEHDA TLAFRRSCRE GICGSCSMCI DGVNTVACLR PVDTDTSSAT TVTPLPHMYV VRDLVVDLTS FYQQYKSVEP WLKRKTKTKT
201: ETTEHAQSPE ERKRLDGLYE CILCACCSAA CPSYWWNAEA FLGPAALLHA YRWVSDSRDE YAAERVQALA EGWDKLYRCR MIKSCTATCP KSLDPAAAIS
301: AMKTLHQLGK P

Best Arabidopsis Sequence Match ( AT5G65165.1 )
(BLAST)

001: MSSVLRLLGR RICNPAAEKV RLSSSLSGGG DFPILNGHKA AQDLSKDTLK SQDITKEKEG QHKEVKKEFK IYRWNPDKPN SKPFLQSFFV DLSSCGPMVL
101: DVLQKIKAED DASLSYRRSC REGICGSCSM NIDGTNTVAC LKPINPNTSK PTIITPLPHM YVIKDLVVDL TNFYQQYKSM EPWLKTRKPP KDGREHRQSP
201: KDRKKLDGLY ECILCACCTT SCPSYWWNPE EFPGPAALLQ AYRWISDSRD EYREERLQAI TESETKVYRC RAIKNCTATC PKGLNPASAI LKMKSKHLLS
301: DPLVRTESV

Arabidopsis Description

SDH2-3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.