Factsheet for HORVU2Hr1G040960.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G026370.1	Barley	mitochondrion	88.7	95.93
HORVU3Hr1G020770.1	Barley	cytosol	61.09	92.41
HORVU2Hr1G040970.1	Barley	mitochondrion	87.45	46.14
HORVU2Hr1G079480.2	Barley	cytosol, plastid	47.7	42.86
HORVU5Hr1G051280.1	Barley	cytosol	14.64	33.65
HORVU5Hr1G122350.1	Barley	cytosol	27.62	21.5
HORVU6Hr1G053680.5	Barley	plastid	36.4	16.93
HORVU4Hr1G056740.1	Barley	cytosol	21.34	11.41
HORVU5Hr1G100200.3	Barley	mitochondrion	21.34	10.99
HORVU5Hr1G100700.3	Barley	plasma membrane	21.34	10.97
HORVU0Hr1G017020.1	Barley	cytosol	20.5	10.96
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	20.5	10.96
HORVU6Hr1G085320.3	Barley	cytosol	20.08	10.88
HORVU4Hr1G056820.1	Barley	plasma membrane	21.34	10.71
HORVU2Hr1G012860.1	Barley	cytosol	21.76	10.68
HORVU6Hr1G085370.1	Barley	cytosol	20.08	10.62
HORVU2Hr1G119310.19	Barley	cytosol	23.85	8.27
HORVU2Hr1G102800.6	Barley	cytosol, plastid	23.85	7.55
HORVU4Hr1G056830.1	Barley	cytosol	1.67	1.37

Protein Annotations

MapMan:17.7.4.1	Gene3D:3.40.50.300	UniProt:A0A287HT59	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU2Hr1G040960
EnsemblPlants:HORVU2Hr1G040960.1	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009	PRINTS:PR00315	PFscan:PS51722
PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	UniParc:UPI000B4661A7	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:199975015..199977183

Molecular Weight (calculated)

22808.9 Da

IEP (calculated)

6.887

GRAVY (calculated)

0.064

Length

239 amino acids

Sequence
(BLAST)

001: PRFRDLPSLL RSPPPKAYPA LRAAVISGPA ALPDVAAAAG PQPPPPSPLV VGLWARSMAT FTRTRPHVNV GTIGHVDHDK TTLTAAITKV LPEAGSAKAV
101: AFDEIDKAPE EKARGITIST VRSHMHTVRV PVIFVQCTHA DYVKNMITGA AQMDGGILVV SAPDGPMPQT KEHILLARQV GVPSLVCFLN KVDAVEDEEL
201: LELVEMELRE MLLXXXXXXX XXXXXXXXXX XXXXXXXXX

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.