Factsheet for HORVU2Hr1G102800.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G444100.1	Wheat	cytosol	86.09	95.45
TraesCS2D01G443300.1	Wheat	cytosol	85.96	95.44
TraesCS2B01G465300.1	Wheat	cytosol	85.96	95.3
Os04t0596500-02	Rice	cytosol	70.73	81.4
Os01t0116600-01	Rice	cytosol	70.46	81.22
EES12776	Sorghum	cytosol	67.95	75.66
GSMUA_Achr1P00050_001	Banana	cytosol	43.97	75.45
Zm00001d026213_P001	Maize	cytosol	70.07	63.73
Solyc12g036410.1.1	Tomato	cytosol	42.52	54.59
CDY61091	Canola	cytosol	9.54	53.73
Solyc03g119290.2.1	Tomato	cytosol	41.19	52.89
CDX78392	Canola	cytosol	43.44	52.23
Bra006069.1-P	Field mustard	cytosol	43.58	52.22
CDX70362	Canola	cytosol	44.5	51.61
VIT_03s0017g00530.t01	Wine grape	cytosol	51.52	51.18
HORVU5Hr1G051280.1	Barley	cytosol	6.75	49.04
CDY40108	Canola	cytosol	46.23	48.54
CDX85751	Canola	cytosol	45.56	48.18
KRH59057	Soybean	cytosol	49.01	46.66
AT5G10630.4	Thale cress	cytosol	45.83	46.57
KRH42938	Soybean	cytosol	48.48	46.51
HORVU2Hr1G119310.19	Barley	cytosol	41.85	45.86
Bra028577.1-P	Field mustard	cytosol	43.97	45.48
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	20.53	34.68
HORVU0Hr1G017020.1	Barley	cytosol	20.53	34.68
HORVU4Hr1G056740.1	Barley	cytosol	20.53	34.68
HORVU5Hr1G100700.3	Barley	plasma membrane	20.93	33.98
HORVU5Hr1G100200.3	Barley	mitochondrion	20.79	33.84
HORVU6Hr1G085320.3	Barley	cytosol	19.6	33.56
HORVU2Hr1G012860.1	Barley	cytosol	21.59	33.47
HORVU4Hr1G056820.1	Barley	plasma membrane	20.93	33.19
HORVU6Hr1G085370.1	Barley	cytosol	19.6	32.74
HORVU3Hr1G020770.1	Barley	cytosol	6.62	31.65
HORVU5Hr1G122350.1	Barley	cytosol	11.26	27.69
HORVU4Hr1G056830.1	Barley	cytosol	10.6	27.3
HORVU0Hr1G026370.1	Barley	mitochondrion	7.68	26.24
HORVU2Hr1G079480.2	Barley	cytosol, plastid	8.74	24.81
HORVU2Hr1G040960.1	Barley	mitochondrion	7.55	23.85
HORVU6Hr1G053680.5	Barley	plastid	14.83	21.79
HORVU2Hr1G040970.1	Barley	mitochondrion	7.68	12.8

Protein Annotations

MapMan:16.8.1.2.7	MapMan:17.3.3.1.2	Gene3D:2.20.28.140	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A287J8K2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G102800	EnsemblPlants:HORVU2Hr1G102800.6	InterPro:IPR000795	InterPro:IPR001876
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PRINTS:PR00315	ScanProsite:PS01358	PFscan:PS51722
PANTHER:PTHR23115	PANTHER:PTHR23115:SF219	SMART:SM00547	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540
SUPFAM:SSF90209	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000B47AC09
InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:698219974..698225810

Molecular Weight (calculated)

82676.0 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.383

Length

755 amino acids

Sequence
(BLAST)

001: RDPVAHAESP LQGFNPPPPT PVRFQFLLTP RPRLRLSPRL FAENPDERER EAELSTYLPS RTPTSHPLQL TSRTMPRKVV SGPDYDDDYA DYEDYEDDYD
101: DDYDETGHAD VKPPVKEKES LKNSSNAVPV LWKCSMCTFD NHETMVYCEM CGVFRESFVK SGKDGSIKVD SVNGISNNSG TSALSNSDST KMPAKTSTTN
201: FDGDSERKYA STSHDKVNSA QLASVGSSSS TGKKKQPIIS DKDVPVERTP QLIADHFQLK EDQGSRVSCS AQNKGSMETL SSDISELSIE RHNVNVAPPY
301: LPEEYKPEGW MLADQESGVL SQLNLAIVGH VDSGKSTLSG RLLHLLGKIS KRDMHKNEKE AKEKGKGSFA YAWAMDESTE ERARGVTMTV AVAYLETKKY
401: RVVLLDSPGH KDFVPNMISG ATQADAAILV VDASTGSFES GMDGDGGKNV GQTKEHAQLI RSFGVEQLIV AVNKMDAIGY SKDRLEFIKV QLGSFLRSCN
501: FRDSAVTWIP LSAVENQNLI KSPSDARFTS WYQGLCLLDA IDSLQLPSRD VSKPLILPIC DVIKSQSTGQ LAAFGKLETG AIRNGSKVLV LPCEQVATVK
601: TIERDSSSCS TARAGDNVAV ILQGIDGNRI IPGGILCHPG FPVPVANYLE LKIRVLDITI PILVGYQVEF HIHHVKEAAR VTKIVALLDK TGKPSKTAPR
701: FLKSKQNAVV QVTLDQAVCV EEFSKCRALG RAFLRSSGST IAVGIVTKIM RQDQH

Best Arabidopsis Sequence Match ( AT5G10630.2 )
(BLAST)

001: MPRKGLSNFD DYDDGFDDDD DAFDYDYDVD IDEHEEEAAA EPKEEIAKTQ GLWRCAICTY DNVETMFVCD ICGVLRHPVA GNQSINKNTA PFKFDAPSPD
101: DLVSNGLTSS KTGPKGSGDA SMRQKEKQDS VEQKPLKKGG DSSETSSRGR HDKLDDKGGA GGIKSGKSLP KAKADMSNET SSSSKYMETS ESLTGTMNKM
201: SLIGETENSS DIKIRGPKSQ SKHKPEEWML LDKESDALSQ LNLAIVGHVD SGKSTLSGRL LHLLGRISQK QMHKYEKEAK LQGKGSFAYA WALDESAEER
301: ERGITMTVAV AYFNSKRHHV VLLDSPGHKD FVPNMIAGAT QADAAILVID ASVGAFEAGF DNLKGQTREH ARVLRGFGVE QVIVAINKMD IVGYSKERFD
401: LIKQHVGSFL QSCRFKDSSL TWIPLSAMEN QNLVAAPSDN RLSSWYQGPC LLDAVDSVKS PDRDVSKPLL MPICDAVRST SQGQVSACGK LEAGAVRPGS
501: KVMVMPSGDQ GTIRSLERDS QACTIARAGD NVALALQGID ANQVMAGDVL CHPDFPVSVA THLELMVLVL EGATPILLGS QLEFHVHHAK EAATVVKLVA
601: MLDPKTGQPT KKSPRCLTAK QSAMLEVSLQ NPVCVETFSE SRALGRVFLR SSGRTVAMGK VTRIIQDS

Arabidopsis Description

Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.