Factsheet for HORVU2Hr1G012860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G075300.1	Wheat	cytosol	95.89	87.62
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	95.69	87.43
TraesCS2B01G091600.1	Wheat	cytosol	95.69	87.43
Solyc03g118990.1.1	Tomato	cytosol	11.5	80.0
EES10540	Sorghum	cytosol	88.09	79.74
Os04t0270100-01	Rice	cytosol	76.39	79.49
Zm00001d004172_P005	Maize	cytosol	87.47	78.74
KRH60492	Soybean	cytosol	76.8	74.06
KRH41785	Soybean	cytosol, nucleus	76.59	74.01
GSMUA_Achr3P07900_001	Banana	cytosol	80.49	73.82
Zm00001d025100_P005	Maize	cytosol	81.52	70.77
VIT_17s0000g02860.t01	Wine grape	plastid	75.36	70.71
PGSC0003DMT400014425	Potato	cytosol	70.23	69.65
AT1G18070.3	Thale cress	cytosol	74.33	66.67
CDY19192	Canola	cytosol	73.72	66.11
CDX96737	Canola	cytosol	69.82	65.64
CDX83874	Canola	endoplasmic reticulum	67.56	63.51
CDY21721	Canola	cytosol	73.51	62.15
CDY26187	Canola	golgi, vacuole	73.92	61.54
CDX81859	Canola	endoplasmic reticulum, golgi, plasma membrane	73.31	61.13
Bra016571.1-P	Field mustard	cytosol	69.82	47.95
HORVU5Hr1G051280.1	Barley	cytosol	9.45	44.23
HORVU4Hr1G056740.1	Barley	cytosol	32.44	35.35
HORVU0Hr1G017020.1	Barley	cytosol	32.24	35.12
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	32.24	35.12
HORVU6Hr1G085320.3	Barley	cytosol	31.42	34.69
HORVU5Hr1G100200.3	Barley	mitochondrion	32.44	34.05
HORVU5Hr1G100700.3	Barley	plasma membrane	32.44	33.98
HORVU6Hr1G085370.1	Barley	cytosol	31.21	33.63
HORVU4Hr1G056820.1	Barley	plasma membrane	32.85	33.61
HORVU3Hr1G020770.1	Barley	cytosol	10.27	31.65
HORVU4Hr1G056830.1	Barley	cytosol	18.89	31.4
HORVU5Hr1G122350.1	Barley	cytosol	16.84	26.71
HORVU0Hr1G026370.1	Barley	mitochondrion	10.88	23.98
HORVU2Hr1G119310.19	Barley	cytosol	30.8	21.77
HORVU2Hr1G040960.1	Barley	mitochondrion	10.68	21.76
HORVU2Hr1G102800.6	Barley	cytosol, plastid	33.47	21.59
HORVU2Hr1G079480.2	Barley	cytosol, plastid	11.7	21.43
HORVU6Hr1G053680.5	Barley	plastid	20.94	19.84
HORVU2Hr1G040970.1	Barley	mitochondrion	10.88	11.7

Protein Annotations

MapMan:17.3.2.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.300	UniProt:A0A287H3Z8	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:G_TR_CS	EnsemblPlantsGene:HORVU2Hr1G012860	EnsemblPlants:HORVU2Hr1G012860.1	InterPro:IPR000795	InterPro:P-loop_NTPase	PFAM:PF00009
PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR23115
PANTHER:PTHR23115:SF36	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540	InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf
InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000B48228D	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:27503508..27512959

Molecular Weight (calculated)

54239.5 Da

IEP (calculated)

7.292

GRAVY (calculated)

-0.284

Length

487 amino acids

Sequence
(BLAST)

001: MYSWNHALSG VNDIQSSLQS LELKTNAAAH EDVQMVVEEE EETKRHLNVV FIGHVDAGKS TAGGQILFLS GQVDDRTIQK YEKEAKDKSR ESWYMAYIMD
101: TNEEERLKGK TVEVGRAHFE TENTRFTILD APGHKSYVPN MISGASQADI GVLVISARKG EFETGYERGG QTREHVLLAK TLGVSKLVVV INKMDEPTVQ
201: WSKERYDEIE GKMVPFLRSS GYNVKKDVQF LPISGLCGAN MKTRMDKSIC SWWNGPCLFE ILDKIEVPLR DPKGPVRMPI IDKYKDMGTV VMGKLESGTI
301: REGDSLLVMP NKSHVKVTGI NLDEKKVRRA GPAENVRVKV SGIEEEDIMA GFVLSSVANP VGAFTEFNAQ LQILELLDNA IFTAGYKAVL HIHSVVEECE
401: IVDLIEEIDM KKAKVTDPKK KKTKRKPLFV KNGAVVVCRV QVTNLICIEK FSDFPQLGRF TLRTEGKTIA VGKVVDVPPA GRTTFSA

Best Arabidopsis Sequence Match ( AT1G18070.1 )
(BLAST)

001: MDLEAEIRAL QLESADENNG VVIPEVHNSH EVENLDKAPE DLKDEVQESI PVPDEQEASE DHDEVMLHPV HNPAKAKEKA AQEKAAKEEA EDVAEANKKR
101: HLNVVFIGHV DAGKSTIGGQ ILFLSGQVDD RQIQKYEKEA KDKSRESWYM AYIMDTNEEE RLKGKTVEVG RAHFETESTR FTILDAPGHK SYVPNMISGA
201: SQADIGVLVI SARKGEFETG YERGGQTREH VQLAKTLGVS KLIVVVNKMD DPTVNWSKER YDEIEQKMVP FLKASGYNTK KDVVFLPISG LMGKNMDQRM
301: GQEICPWWSG PSFFEVLDSI EIPPRDPNGP FRMPIIDKFK DMGTVVMGKV ESGSIREGDS LVVMPNKEQV KVVAIYCDED KVKRAGPGEN LRVRITGIED
401: EDILSGFVLS SIVNPVPAVT EFVAQLQILE LLDNAIFTAG YKAILHIHAV VEECEIIELK SQIDLKTRKP MKKKVLFVKN GAAVVCRIQV TNSICIEKFS
501: DFPQLGRFTL RTEGKTIAVG KVTELLSSVS SA

Arabidopsis Description

T10F20.8 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.