Factsheet for HORVU5Hr1G122350.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040673_P001	Maize	mitochondrion	26.71	71.93
TraesCS5D01G542300.1	Wheat	mitochondrion	100.0	68.07
TraesCS1B01G431000.1	Wheat	cytosol	88.6	68.0
TraesCS5B01G545200.1	Wheat	mitochondrion	100.0	67.92
TraesCS4A01G330400.1	Wheat	mitochondrion	100.0	67.92
TraesCS5B01G545300.2	Wheat	cytosol	82.74	63.82
Os03t0851100-01	Rice	mitochondrion	89.25	60.49
EER90508	Sorghum	mitochondrion	87.3	59.16
KRH11356	Soybean	mitochondrion	79.15	58.84
GSMUA_Achr8P06040_001	Banana	mitochondrion	86.97	58.68
Zm00001d034856_P003	Maize	mitochondrion	86.32	58.63
KRH20931	Soybean	mitochondrion	85.02	58.0
Solyc09g073000.2.1	Tomato	plastid	84.36	57.56
PGSC0003DMT400009804	Potato	mitochondrion	84.36	57.56
AT4G02930.1	Thale cress	mitochondrion	85.02	57.49
PGSC0003DMT400037909	Potato	plastid	84.04	57.21
KRG95471	Soybean	nucleus	84.04	57.08
Solyc06g008940.2.1	Tomato	unclear	83.71	56.98
KRH67153	Soybean	nucleus	84.04	56.83
Bra000853.1-P	Field mustard	mitochondrion	83.71	56.73
CDX90912	Canola	mitochondrion	83.71	56.73
CDY17978	Canola	mitochondrion	83.71	56.73
Bra036234.1-P	Field mustard	mitochondrion	83.71	56.61
CDY21923	Canola	mitochondrion	84.04	56.58
VIT_07s0104g00600.t01	Wine grape	mitochondrion	82.74	56.57
CDY22085	Canola	mitochondrion	83.71	56.48
Zm00001d012846_P005	Maize	mitochondrion	80.13	54.19
CDY62618	Canola	endoplasmic reticulum, mitochondrion	62.54	51.47
HORVU2Hr1G079480.2	Barley	cytosol, plastid	35.5	40.98
HORVU3Hr1G020770.1	Barley	cytosol	20.85	40.51
HORVU6Hr1G053680.5	Barley	plastid	54.07	32.3
HORVU0Hr1G026370.1	Barley	mitochondrion	21.82	30.32
HORVU2Hr1G040960.1	Barley	mitochondrion	21.5	27.62
VIT_12s0034g01800.t01	Wine grape	cytosol	32.25	26.83
VIT_17s0000g09140.t01	Wine grape	cytosol	13.68	26.25
HORVU4Hr1G056830.1	Barley	cytosol	23.13	24.23
HORVU6Hr1G085320.3	Barley	cytosol	28.99	20.18
HORVU4Hr1G056740.1	Barley	cytosol	29.32	20.13
HORVU2Hr1G013680.1	Barley	cytosol, plasma membrane	28.99	19.91
HORVU0Hr1G017020.1	Barley	cytosol	28.99	19.91
HORVU6Hr1G085370.1	Barley	cytosol	28.99	19.69
HORVU5Hr1G100200.3	Barley	mitochondrion	29.32	19.4
HORVU5Hr1G100700.3	Barley	plasma membrane	29.32	19.35
HORVU5Hr1G051280.1	Barley	cytosol	6.51	19.23
HORVU4Hr1G056820.1	Barley	plasma membrane	29.64	19.12
HORVU2Hr1G012860.1	Barley	cytosol	26.71	16.84
VIT_05s0029g00030.t01	Wine grape	cytosol	6.19	14.5
HORVU2Hr1G040970.1	Barley	mitochondrion	21.17	14.35
HORVU2Hr1G119310.19	Barley	cytosol	25.73	11.47
HORVU2Hr1G102800.6	Barley	cytosol, plastid	27.69	11.26

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005524	GO:GO:0005525	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0030312	GO:GO:0046686	GO:GO:0050897	EnsemblPlantsGene:HORVU5Hr1G122350	EnsemblPlants:HORVU5Hr1G122350.1
InterPro:IPR000795	UniProt:M0YTA8	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144
PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540
InterPro:TF_GTP-bd_dom	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	UniParc:UPI000296625B	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:661995105..661999112

Molecular Weight (calculated)

33318.8 Da

IEP (calculated)

4.736

GRAVY (calculated)

0.051

Length

307 amino acids

Sequence
(BLAST)

001: MITGAAQMDG GILVVSAPDG PMPQTKEHIL LARQVGVPSL VCFLNKVDAV EDEELLELVE MELRELLSFY KFPGDDIPII RGSALSALNG TNEEIGKNAI
101: LKLMDAVDSY IPDPVRVLDK SFLMPIEGIF SIQGRGTVVT GRIEQGVIKT GEDVEVIGLT ESGPVKTTVT GVEMFKKMMD HGEAGDNVGL LLRGLKRGDV
201: ERGQVVCKPG TVKTYKKFEA EIYVLTKDEG GRHTAFFSNY SPQFYFRTAD ICGKIELPPD VKMVMPGDNV TAIFELMLPV PLEPGLRFAL REGGRTVGAG
301: VVAKVMS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.