Factsheet for TraesCS4A01G330400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G122350.1	Barley	cytosol	67.92	100.0
TraesCS5B01G545200.1	Wheat	mitochondrion	99.34	99.34
TraesCS5D01G542300.1	Wheat	mitochondrion	98.67	98.89
Os03t0851100-01	Rice	mitochondrion	89.16	88.96
EER90508	Sorghum	mitochondrion	87.39	87.2
Zm00001d034856_P003	Maize	mitochondrion	86.06	86.06
TraesCS1B01G431000.1	Wheat	cytosol	75.66	85.5
TraesCS5B01G545300.2	Wheat	cytosol	72.57	82.41
GSMUA_Achr8P06040_001	Banana	mitochondrion	82.3	81.76
Solyc09g073000.2.1	Tomato	plastid	78.98	79.33
PGSC0003DMT400009804	Potato	mitochondrion	78.98	79.33
Zm00001d012846_P005	Maize	mitochondrion	79.42	79.07
PGSC0003DMT400037909	Potato	plastid	78.54	78.71
Solyc06g008940.2.1	Tomato	unclear	78.32	78.49
VIT_07s0104g00600.t01	Wine grape	mitochondrion	77.88	78.4
KRG95471	Soybean	nucleus	78.32	78.32
CDY22085	Canola	mitochondrion	78.76	78.24
Bra036234.1-P	Field mustard	mitochondrion	78.54	78.19
AT4G02930.1	Thale cress	mitochondrion	78.54	78.19
Bra000853.1-P	Field mustard	mitochondrion	78.32	78.15
CDX90912	Canola	mitochondrion	78.32	78.15
CDY17978	Canola	mitochondrion	78.32	78.15
CDY21923	Canola	mitochondrion	78.76	78.07
KRH20931	Soybean	mitochondrion	77.65	78.0
KRH67153	Soybean	nucleus	78.1	77.75
Zm00001d040673_P001	Maize	mitochondrion	18.14	71.93
KRH11356	Soybean	mitochondrion	65.71	71.91
VIT_17s0000g09140.t01	Wine grape	cytosol	23.23	65.62
VIT_05s0029g00030.t01	Wine grape	cytosol	18.36	63.36
TraesCS6A01G209800.1	Wheat	plastid	55.53	53.4
CDY62618	Canola	endoplasmic reticulum, mitochondrion	43.36	52.55
VIT_12s0034g01800.t01	Wine grape	cytosol	25.0	30.62
TraesCS4A01G107600.1	Wheat	cytosol	27.21	27.52
TraesCS4A01G107700.1	Wheat	cytosol	27.21	27.52
TraesCS5A01G415400.1	Wheat	cytosol	27.21	27.52
TraesCS5A01G415600.1	Wheat	cytosol	27.21	27.52
TraesCS2A01G083000.1	Wheat	cytosol	26.99	27.29
TraesCS2A01G083300.1	Wheat	cytosol, golgi	26.77	27.07
TraesCS2A01G076700.1	Wheat	cytosol, golgi, nucleus	24.78	21.01
TraesCS2A01G444100.1	Wheat	cytosol	26.77	17.77
TraesCS2A01G592500.1	Wheat	cytosol	26.77	17.66

Protein Annotations

MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	InterPro:EFTU_2	InterPro:EFTu-like_2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003746	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005524	GO:GO:0005525	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0030312	GO:GO:0046686	GO:GO:0050897	InterPro:G_TR_CS	InterPro:IPR000795
HAMAP:MF_00118_B	InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315
ScanProsite:PS00301	PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447	SUPFAM:SSF50465
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00485	EnsemblPlantsGene:TraesCS4A01G330400
EnsemblPlants:TraesCS4A01G330400.1	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C	InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	TIGR:cd01884
TIGR:cd03697	TIGR:cd03707	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:615212565..615216245

Molecular Weight (calculated)

48305.7 Da

IEP (calculated)

6.363

GRAVY (calculated)

0.008

Length

452 amino acids

Sequence
(BLAST)

001: MAAAAVLRGG SRRVLAYPAL RAAVISGPAA LPDVPAAAGP QPPPPSPLAA GLWARSMATF TRTKPHVNVG TIGHVDHGKT TLTAAITKVL AEAGSAKAVA
101: FDEIDKAPEE KARGITISTA HVEYETAKRH YAHVDCPGHA DYVKNMITGA AQMDGGILVV SAPDGPMPQT KEHILLARQV GVPSLVCFLN KVDAVEDEEL
201: LELVEMELRE LLSFYKFPGD DIPIIRGSAL SALNGTNEEI GKNAILKLMD AVDSYIPDPV RVLDKSFLMP IEGIFSIQGR GTVVTGRIEQ GVIKTGEDVE
301: VIGLTESGPV KTTVTGVEMF KKMMDHGEAG DNVGLLLRGL KRGDVERGQV VCKPGTVKTY KKFEAEIYVL TKDEGGRHTA FFSNYSPQFY FRTADICGKI
401: ELPPDVKMVM PGDNVTAIFE LMLPVPLEPG LRFALREGGR TVGAGVVAKV MS

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.