CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11356	Soybean	mitochondrion	78.67	85.71
HORVU5Hr1G122350.1	Barley	cytosol	58.0	85.02
GSMUA_Achr8P06040_001	Banana	mitochondrion	83.11	82.2
GSMUA_Achr3P24830_001	Banana	mitochondrion	82.44	81.54
KRG95471	Soybean	nucleus	81.56	81.19
KRH67153	Soybean	nucleus	81.33	80.62
Os03t0851100-01	Rice	mitochondrion	81.11	80.57
EER90508	Sorghum	mitochondrion	80.67	80.13
Zm00001d034856_P003	Maize	mitochondrion	79.56	79.2
TraesCS5B01G545200.1	Wheat	mitochondrion	78.22	77.88
TraesCS4A01G330400.1	Wheat	mitochondrion	78.0	77.65
TraesCS5D01G542300.1	Wheat	mitochondrion	77.56	77.38
TraesCS1B01G431000.1	Wheat	cytosol	67.11	75.5
Zm00001d012846_P005	Maize	mitochondrion	75.33	74.67
Zm00001d040673_P001	Maize	mitochondrion	18.44	72.81
TraesCS5B01G545300.2	Wheat	cytosol	64.22	72.61
VIT_17s0000g09140.t01	Wine grape	cytosol	23.56	66.25
VIT_05s0029g00030.t01	Wine grape	cytosol	18.67	64.12
KRH63638	Soybean	endoplasmic reticulum, nucleus, plastid	59.56	55.83
KRH54307	Soybean	mitochondrion, plastid	59.11	55.53
KRH57147	Soybean	plastid	58.0	54.49
KRH03857	Soybean	plastid	51.33	51.68
KRH33293	Soybean	plastid	25.11	48.09
KRH57863	Soybean	nucleus	28.0	28.19
KRH04781	Soybean	endoplasmic reticulum	28.0	28.19
KRG93959	Soybean	nucleus	27.78	27.96
KRH07098	Soybean	cytosol, mitochondrion, nucleus	27.78	27.96
KRH58241	Soybean	nucleus	27.78	27.96
KRH34904	Soybean	nucleus	27.56	27.68
KRH41785	Soybean	cytosol, nucleus	25.33	22.62
KRH60492	Soybean	cytosol	25.33	22.57
KRH42938	Soybean	cytosol	26.67	15.25
KRH59057	Soybean	cytosol	26.67	15.13

Protein Annotations

EntrezGene:102667962	MapMan:17.7.4.1	Gene3D:2.40.30.10	Gene3D:3.40.50.300	EMBL:ACUP02008329	InterPro:EFTU_2
InterPro:EFTu-like_2	EnsemblPlantsGene:GLYMA_13G210600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003746	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006412	GO:GO:0006414	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:G_TR_CS
UniProt:I1M167	InterPro:IPR000795	EnsemblPlants:KRH20931	ProteinID:KRH20931	ProteinID:KRH20931.1	HAMAP:MF_00118_B
InterPro:P-loop_NTPase	PFAM:PF00009	PFAM:PF03143	PFAM:PF03144	PRINTS:PR00315	ScanProsite:PS00301
PFscan:PS51722	PANTHER:PTHR43721	PANTHER:PTHR43721:SF12	SUPFAM:SSF50447	SUPFAM:SSF50465	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:TF_GTP-bd_dom	TIGRFAMs:TIGR00231	TIGRFAMs:TIGR00485	InterPro:Transl_B-barrel_sf	InterPro:Transl_elong_EF1A/Init_IF2_C
InterPro:Transl_elong_EFTu/EF1A_C	InterPro:Transl_elong_EFTu/EF1A_bac/org	UniParc:UPI00023CEAD3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:32434532..32438712

Molecular Weight (calculated)

49151.5 Da

IEP (calculated)

7.362

GRAVY (calculated)

-0.133

Length

450 amino acids

Sequence
(BLAST)

001: MASVAFRNLN SKRFLFSLHF TNANYHSLSR GTCTVISQNC NNAPPLELVS LRRSLATFAR TKPHLNVGTI GHVDHGKTTL TAAITKVLAE EGKAKAIAFE
101: DIDKAPEEKK RGITIATAHV EYETAKRHYA HVDCPGHADY VKNMITGAAQ MDGGILVVSA PDGPMPQTKE HILLARQVGV PSLVCFLNKV DAVDDPELLE
201: LVEMELRELL NFYKFPGDDI PIVRGSALAA LQGTNEELGK KAILKLMDAV DEYISDPVRQ LDKPFLMPVE DVFSIQGRGT VVTGRVEQGT IKVGEEVEVL
301: GLTQSGPLKT TVTGVEMFKK ILDRGEAGDN VGLLLRGLKR DDVQRGMVVT KPGAFKTYKK FEAEIYVLSK DEGGRHTAFF SNYKPQFYLR TADVTGKVEL
401: PESVKMVMPG DNVTATFELI SPVPLEIGQR FALREGGRTV GAGVVSKVMA

Best Arabidopsis Sequence Match ( AT4G02930.1 )
(BLAST)

001: MASVVLRNPS SKRLVPFSSQ IYSRCGASVT SSYSISHSIG GDDLSSSTFG TSSFWRSMAT FTRNKPHVNV GTIGHVDHGK TTLTAAITKV LAEEGKAKAI
101: AFDEIDKAPE EKKRGITIAT AHVEYETAKR HYAHVDCPGH ADYVKNMITG AAQMDGGILV VSGPDGPMPQ TKEHILLARQ VGVPSLVCFL NKVDVVDDPE
201: LLELVEMELR ELLSFYKFPG DDIPIIRGSA LSALQGTNDE IGRQAILKLM DAVDEYIPDP VRVLDKPFLM PIEDVFSIQG RGTVATGRIE QGVIKVGEEV
301: EILGLREGGV PLKSTVTGVE MFKKILDNGQ AGDNVGLLLR GLKREDIQRG MVIAKPGSCK TYKKFEAEIY VLTKDEGGRH TAFFSNYRPQ FYLRTADITG
401: KVELPENVKM VMPGDNVTAV FELIMPVPLE TGQRFALREG GRTVGAGVVS KVMT

Arabidopsis Description

TUFAElongation factor Tu, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT91]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.